Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH69305 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G51180.1 | KRH69305 | AT1G14340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90131 | Soybean | cytosol | 94.12 | 94.38 |
| VIT_16s0013g01410.t01 | Wine grape | cytosol | 66.11 | 67.82 |
| Solyc05g052020.2.1 | Tomato | cytosol | 68.63 | 67.31 |
| PGSC0003DMT400069125 | Potato | cytosol | 68.35 | 67.03 |
| CDY05841 | Canola | cytosol | 63.59 | 66.96 |
| GSMUA_Achr4P28970_001 | Banana | cytosol | 66.39 | 66.57 |
| GSMUA_Achr7P06920_001 | Banana | cytosol | 60.22 | 66.56 |
| Bra035731.1-P | Field mustard | cytosol | 63.59 | 66.37 |
| CDX71694 | Canola | cytosol | 65.27 | 66.01 |
| PGSC0003DMT400027928 | Potato | nucleus | 66.39 | 65.83 |
| GSMUA_Achr2P12000_001 | Banana | cytosol | 63.31 | 65.7 |
| AT5G51180.1 | Thale cress | cytoskeleton, cytosol, nucleus | 65.55 | 65.55 |
| Solyc03g093510.2.1 | Tomato | nucleus | 65.55 | 64.82 |
| GSMUA_Achr5P15490_001 | Banana | cytosol | 58.26 | 64.6 |
| OQU79861 | Sorghum | cytosol | 61.9 | 62.43 |
| TraesCS7A01G306200.1 | Wheat | cytosol | 61.06 | 61.76 |
| Os08t0143700-01 | Rice | cytoskeleton, cytosol, nucleus | 60.5 | 61.71 |
| TraesCS7B01G206400.1 | Wheat | cytosol | 60.78 | 61.47 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 60.5 | 61.36 |
| EES05791 | Sorghum | cytosol | 58.54 | 60.58 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 59.1 | 59.94 |
| TraesCS6A01G243800.1 | Wheat | cytosol | 58.26 | 59.43 |
| Zm00001d017470_P001 | Maize | cytosol | 58.82 | 58.99 |
| TraesCS6B01G280500.1 | Wheat | cytoskeleton, cytosol, nucleus | 58.26 | 58.76 |
| HORVU6Hr1G062800.5 | Barley | cytosol | 58.26 | 58.26 |
| Zm00001d024645_P001 | Maize | cytosol | 59.66 | 55.32 |
| HORVU7Hr1G072940.6 | Barley | plastid | 56.3 | 50.38 |
| KRH54906 | Soybean | plastid | 52.94 | 44.89 |
| KRH62985 | Soybean | plastid | 52.66 | 44.87 |
| KRH62120 | Soybean | nucleus | 47.34 | 40.82 |
| KRH52824 | Soybean | nucleus | 47.34 | 40.82 |
| Os02t0655600-01 | Rice | cytosol | 15.13 | 39.13 |
| KRH54734 | Soybean | cytosol | 9.24 | 33.0 |
| KRH42854 | Soybean | plastid | 41.46 | 32.82 |
| KRH58952 | Soybean | plastid | 41.74 | 29.22 |
Protein Annotations
| EntrezGene:100816943 | Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase | EMBL:ACUP02006473 | InterPro:DUF676_lipase-like |
| EnsemblPlantsGene:GLYMA_10G119200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0044255 | GO:GO:0052689 | UniProt:I1LAF1 | InterPro:IPR029058 |
| ProteinID:KRH33379.1 | ProteinID:KRH33380.1 | EnsemblPlants:KRH33381 | ProteinID:KRH33381 | ProteinID:KRH33381.1 | ProteinID:KRH33382.1 |
| PFAM:PF05057 | PANTHER:PTHR12482 | PANTHER:PTHR12482:SF14 | SUPFAM:SSF53474 | UniParc:UPI000233C34B | : |
Description
hypothetical protein
Coordinates
chr10:-:30379163..30387153
Molecular Weight (calculated)
40163.7 Da
IEP (calculated)
6.196
GRAVY (calculated)
-0.343
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEKKVCAS ESAVDGSRDV WSSEPSLASS ADHLVVMVNG ILGRETDWKY AAEKFVRELP DKVFVHCSER NVSMLTLDGV DVMGGRLAEE VLEVIKSKPN
101: MCKISFVAHS VGGLVARYAI GRLYRPPEKG SMADSCNEES KESSVGTIGG LEAMNFIAVA APHLGSRGNK QVPFLLGVPA FEKVASCVIH FIFRRTGRHL
201: FLTDDDEGKP PLLKRMVQDY GDLYFMSALR AFKRRFAYSN VDYDHIVGWR TSSIRRQSEL ANWKDTNNEK YPHVVYEEHC KACSDAEQCD STEGNSYDKI
301: EEELVTGLSR VSWEKVDVSF RNSKHRFSSH TIIQVKDQIT QIEGADVIQH MIDHFLL
101: MCKISFVAHS VGGLVARYAI GRLYRPPEKG SMADSCNEES KESSVGTIGG LEAMNFIAVA APHLGSRGNK QVPFLLGVPA FEKVASCVIH FIFRRTGRHL
201: FLTDDDEGKP PLLKRMVQDY GDLYFMSALR AFKRRFAYSN VDYDHIVGWR TSSIRRQSEL ANWKDTNNEK YPHVVYEEHC KACSDAEQCD STEGNSYDKI
301: EEELVTGLSR VSWEKVDVSF RNSKHRFSSH TIIQVKDQIT QIEGADVIQH MIDHFLL
001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
Arabidopsis Description
AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.