CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42854	Soybean	plastid	73.0	16.19
KRH58952	Soybean	plastid	68.0	13.33
KRH62985	Soybean	plastid	40.0	9.55
KRG90131	Soybean	cytosol	33.0	9.27
KRH54906	Soybean	plastid	39.0	9.26
KRH33381	Soybean	cytosol	33.0	9.24
KRH52824	Soybean	nucleus	34.0	8.21
KRH62120	Soybean	nucleus	34.0	8.21

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:ACUP02003574	InterPro:DUF676_lipase-like	EnsemblPlantsGene:GLYMA_06G205300
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	InterPro:IPR029058	UniProt:K7KW85	EnsemblPlants:KRH54734
ProteinID:KRH54734	ProteinID:KRH54734.1	PFAM:PF05057	PANTHER:PTHR12482	PANTHER:PTHR12482:SF11	SUPFAM:SSF53474
UniParc:UPI000295AF30	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:19396421..19397753

Molecular Weight (calculated)

11081.2 Da

IEP (calculated)

9.339

GRAVY (calculated)

-0.309

Length

100 amino acids

Sequence
(BLAST)

1: MLEKVYLYHL ERISSSNTYT KTFIGIDGAG KRLADEVLQV VKKGQSLKRI SFLAHSLGGL FARYAIVVLY SPDTYSKDQP GDLANSMTEN SQGTSFQEKG

Best Arabidopsis Sequence Match ( AT1G29120.6 )
(BLAST)

001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFGSNRSWN QQGRRVQAMS STAQRKFSLS KGDSDDKNEP
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDRILCIS VAV

Arabidopsis Description

AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.