CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2
extracellular 1
cytosol 1
plasma membrane 1
golgi 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g01230.t01	Wine grape	cytosol	68.29	83.47
KRH58952	Soybean	plastid	90.91	80.39
KRH54734	Soybean	cytosol	16.19	73.0
CDY15650	Canola	cytosol	41.69	72.31
Solyc02g076870.2.1	Tomato	plastid	68.51	68.21
AT1G29120.8	Thale cress	plastid	68.51	67.76
Bra010851.1-P	Field mustard	plastid	66.52	67.42
CDX90168	Canola	plastid	66.52	67.42
CDY43318	Canola	plastid	66.52	67.26
Zm00001d045311_P015	Maize	golgi, mitochondrion	43.02	64.88
PGSC0003DMT400026437	Potato	cytosol	25.72	61.7
GSMUA_Achr10P...	Banana	cytosol	55.65	59.2
TraesCS7D01G105700.1	Wheat	plastid	56.32	58.93
TraesCS7B01G008200.1	Wheat	plastid	56.32	58.93
TraesCS7A01G110400.1	Wheat	plastid	55.88	58.33
KXG19329	Sorghum	plastid	57.21	58.24
Os06t0154400-01	Rice	cytosol, nucleus, plastid	23.06	53.89
HORVU7Hr1G023560.21	Barley	nucleus	55.88	48.09
KRH33381	Soybean	cytosol	32.82	41.46
KRG90131	Soybean	cytosol	32.37	41.01
KRH62985	Soybean	plastid	36.59	39.38
KRH54906	Soybean	plastid	36.59	39.19
KRH52824	Soybean	nucleus	33.04	35.99
KRH62120	Soybean	nucleus	32.37	35.27

Protein Annotations

EntrezGene:100806373	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:ACUP02004833	InterPro:DUF676_lipase-like
EnsemblPlantsGene:GLYMA_08G115700	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	UniProt:I1KSD8	InterPro:IPR029058
EnsemblPlants:KRH42854	ProteinID:KRH42854	ProteinID:KRH42854.1	PFAM:PF05057	PANTHER:PTHR12482	PANTHER:PTHR12482:SF11
SUPFAM:SSF53474	UniParc:UPI00023C5B37	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:8867157..8875595

Molecular Weight (calculated)

49075.4 Da

IEP (calculated)

9.942

GRAVY (calculated)

-0.278

Length

451 amino acids

Sequence
(BLAST)

001: MATAPFIHAR CAYSPRISNR NNKPSSQQGP LASSSSHASS SSSPSSSSFS HPSGTNSGQR HQGLRAQAMS TVTLGNSIAS IGNLKNDPDH LLVLVHGILA
101: STADWTYAEA ELKRRLGKNF LIYVSSSNTY TKTFTGIDGA GKRLADEVLQ VVKKTKSLKR ISFLAHSLGG LFARYAIAVL YSPDTYSRDQ PGDLANSMTE
201: NSQGTTLSRG GMIAGLEPIN FITLATPHLG VRGKKQLPFL LGVPILEKLA APIAPFFVGQ TGSQLFLTDG KPDKPPLLLR MASDSDDGKF LSALGAFRCR
301: IIYANVSYDH MVGWRTSSIR RETELSKKPP RQSLDGYKHV VDVEYCPPVP SDGPKFPPKA VKAKEAAQNA PNTQNTVEYH EIVEDEMIRG LQQLGWKKVD
401: VSFHSAFWPF FAHNNIHVKN EWFHNAGVGV IAHVAESLRQ LEASSFLSAS L

Best Arabidopsis Sequence Match ( AT1G29120.1 )
(BLAST)

001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFGSNRSWN QQGRRVQAMS STAQRKFSLS KGDSDDKNEP
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDHMVGWR TSSIRRETEL IKPSRRSLDG YKHVVDVEYC PPVSSDGAHF PPEAAKAKEA AQSSPSPQNT LEYHEIVEEE MIRGLQRLGW
401: KKVDVSFHST FWPYLAHNNI HVKSERLYKA GAGVIAHVAD SIKQQESSTF ITASL

Arabidopsis Description

AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.