CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62120	Soybean	nucleus	94.93	94.93
VIT_18s0001g08360.t01	Wine grape	nucleus	61.59	62.5
CDY31052	Canola	nucleus	55.56	61.5
CDY20663	Canola	nucleus	55.56	60.21
Bra018465.1-P	Field mustard	nucleus	51.45	57.41
AT1G10040.1	Thale cress	nucleus	57.0	57.28
Solyc04g077180.1.1	Tomato	nucleus	50.48	53.59
Os03t0726800-01	Rice	cytosol	47.83	51.43
KXG37661	Sorghum	nucleus	47.83	51.3
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	47.34	51.17
PGSC0003DMT400012617	Potato	nucleus	52.17	50.35
TraesCS4D01G057800.2	Wheat	mitochondrion	47.34	50.26
TraesCS4A01G256900.1	Wheat	nucleus	47.34	50.13
KRH62985	Soybean	plastid	50.72	50.12
KRH54906	Soybean	plastid	50.72	49.88
KRG90131	Soybean	cytosol	40.82	47.47
KRH33381	Soybean	cytosol	40.82	47.34
HORVU4Hr1G009670.6	Barley	cytosol	47.1	47.33
GSMUA_Achr3P30660_001	Banana	nucleus	50.0	46.94
TraesCS5D01G148300.1	Wheat	mitochondrion	15.22	39.62
KRH54734	Soybean	cytosol	8.21	34.0
KRH42854	Soybean	plastid	35.99	33.04
KRH58952	Soybean	plastid	35.75	29.02

Protein Annotations

EntrezGene:100784612	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:ACUP02003436	InterPro:DUF676_lipase-like
EnsemblPlantsGene:GLYMA_06G089100	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	InterPro:IPR029058	UniProt:K7KU16
ProteinID:KRH52822.1	ProteinID:KRH52823.1	EnsemblPlants:KRH52824	ProteinID:KRH52824	ProteinID:KRH52824.1	PFAM:PF05057
PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	SUPFAM:SSF53474	UniParc:UPI000294EE3A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:6916966..6921718

Molecular Weight (calculated)

46590.5 Da

IEP (calculated)

9.060

GRAVY (calculated)

-0.507

Length

414 amino acids

Sequence
(BLAST)

001: MMDSERALTQ VQEIEQEGGV GGGTNKKMEV KNETNKKKRS SYFPKFGCFR IEHDASGRGF DIEVADESGQ RPTPTHLIIM VNGLVGSAQN WKFAAKQFLK
101: RYPKDTIVHC SERNSSMLTF DGVDVMGDRL AEEVISVIKR HPSVQKISFV GHSLGGLVAR YAIAKLYGRD ISMELSQGNG HCESQVSDQE CHDRKYEGKI
201: AGLEPINFIT SATPHLGSRG HKQVPMFCGF YSLEKAVSRV AGVFGKTGKH LFLTDSDNGK PPLLLQMVRD SEDIKFLSAL RSFKHRVAYA NVRYDQLVGW
301: STSSIRRRKE LPKRRHLSRH EKYPHIVNVE TEKSTSVVAD EVHDESRVSS GSSKLDFEEE MIRSLTTMSW DRIDVSFSGS MQKILAHSTI QVKTYRINSD
401: GADVIQHMID NFQI

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.