Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G057600.2 | Wheat | cytosol, mitochondrion | 71.07 | 29.5 |
| TraesCS4D01G057800.2 | Wheat | mitochondrion | 69.81 | 28.46 |
| HORVU4Hr1G009670.6 | Barley | cytosol | 71.07 | 27.43 |
| Os03t0726800-01 | Rice | cytosol | 60.38 | 24.94 |
| KXG37661 | Sorghum | nucleus | 59.75 | 24.61 |
| GSMUA_Achr3P30660_001 | Banana | nucleus | 51.57 | 18.59 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 37.11 | 16.76 |
| KRH62120 | Soybean | nucleus | 40.25 | 15.46 |
| KRH52824 | Soybean | nucleus | 39.62 | 15.22 |
| Bra018465.1-P | Field mustard | nucleus | 35.22 | 15.09 |
| CDY31052 | Canola | nucleus | 35.22 | 14.97 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 32.7 | 14.77 |
| CDY20663 | Canola | nucleus | 35.22 | 14.66 |
| Solyc04g077180.1.1 | Tomato | nucleus | 35.85 | 14.62 |
| VIT_18s0001g08360.t01 | Wine grape | nucleus | 36.48 | 14.22 |
| TraesCS7D01G281400.3 | Wheat | plastid | 37.74 | 13.89 |
| PGSC0003DMT400012617 | Potato | nucleus | 37.11 | 13.75 |
| AT1G10040.1 | Thale cress | nucleus | 35.22 | 13.59 |
| TraesCS6D01G329100.1 | Wheat | plastid | 37.11 | 12.94 |
| TraesCS7D01G105700.1 | Wheat | plastid | 27.67 | 10.21 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G148300.1 | EnsemblPlantsGene:TraesCS5D01G148300 | PANTHER:PTHR12482 | PANTHER:PTHR12482:SF21 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:-:235907432..235912993
Molecular Weight (calculated)
18739.3 Da
IEP (calculated)
9.743
GRAVY (calculated)
-0.583
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHLRLADYN STYVKGNHRK KHRSALHSFK RYVAYSNVCG DFVVGWKTSS IRRQHELPKK EDFVDDVRYP HVVYVEKPKA QDVDFSDEMI YQEKTTSEME
101: EVTLKSLNRI PWERVDVSFK RSRQWIFAHS TIQVQLSLPS LALSFTDLSA RRFPDLLSS
101: EVTLKSLNRI PWERVDVSFK RSRQWIFAHS TIQVQLSLPS LALSFTDLSA RRFPDLLSS
001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
Arabidopsis Description
AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.