Factsheet for PGSC0003DMT400012617

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g077180.1.1	Tomato	nucleus	83.22	91.54
PGSC0003DMT400070685	Potato	cytosol	8.86	62.3
CDY31052	Canola	nucleus	47.79	54.81
CDY20663	Canola	nucleus	48.48	54.45
VIT_18s0001g08360.t01	Wine grape	nucleus	50.58	53.19
Bra018465.1-P	Field mustard	nucleus	45.69	52.83
KRH62120	Soybean	nucleus	50.58	52.42
KRH52824	Soybean	nucleus	50.35	52.17
AT1G10040.1	Thale cress	nucleus	49.65	51.7
Os03t0726800-01	Rice	cytosol	44.06	49.09
KXG37661	Sorghum	nucleus	43.36	48.19
PGSC0003DMT400027928	Potato	nucleus	40.09	47.78
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	42.19	47.26
TraesCS4D01G057800.2	Wheat	mitochondrion	42.19	46.41
PGSC0003DMT400069125	Potato	cytosol	39.16	46.15
TraesCS4A01G256900.1	Wheat	nucleus	41.96	46.04
GSMUA_Achr3P30660_001	Banana	nucleus	46.39	45.12
HORVU4Hr1G009670.6	Barley	cytosol	41.49	43.2
TraesCS5D01G148300.1	Wheat	mitochondrion	13.75	37.11
PGSC0003DMT400026437	Potato	cytosol	16.08	36.7
PGSC0003DMT400026438	Potato	cytosol	13.75	33.91

Protein Annotations

EnsemblPlants:PGSC0003DMT400012617	EnsemblPlantsGene:PGSC0003DMG400004933	EntrezGene:102600845	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like
InterPro:IPR029058	PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	PGSC:PGSC0003DMG400004933	RefSeq:XP_006356810.1
SUPFAM:SSF53474	UniParc:UPI0002954AE9	UniProt:M1A1J5	MapMan:35.2	:	:

Description

Serine esterase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004933]

Coordinates

chr4:-:66161064..66168039

Molecular Weight (calculated)

48211.5 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.462

Length

429 amino acids

Sequence
(BLAST)

001: MGSSKMDKGL NFSDEDGVEE RKSEMGIENK ESKKSEMGFE KSNKKTKRKR FFIFPKFACM RLDDEFPVVE TPAHEGGFDV ETSQKGPGHA PNHLVVMVNG
101: IIGSVDDWKY AAEQFVKAYP RDIIVYRSRS NYSKLTFDGV DVMGTRLAEE VQSVVKRTPH LQKISFIGHS LGGLVCRYAI AKLYEQSSAR IACGQDMECS
201: LNGSTDSCAE EVSKRKIVGL EPVNFITCAT PHLGCRGHKQ APAFCGLYSV EKVAARSSWL LGRSGRHLFL KDHDEGKPPL LLRMANDSED LPFISALQSF
301: KRRVAYANTN FDYLVGWSTS SLRRRSELPK RRNMKKVDKY PHIVNVDEAT SVSSTEETPT MANINVHNSQ EMEEAMIRGL TKLSWERVDV SFKGSIQRFL
401: AHTAIQVQSY NLNSDGVDVI QHMIDNFAL

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.