Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G256900.1 | Wheat | nucleus | 97.18 | 96.93 |
| TraesCS4B01G057600.2 | Wheat | cytosol, mitochondrion | 95.13 | 96.87 |
| HORVU4Hr1G009670.6 | Barley | cytosol | 93.33 | 88.35 |
| Os03t0726800-01 | Rice | cytosol | 80.26 | 81.3 |
| KXG37661 | Sorghum | nucleus | 76.92 | 77.72 |
| TraesCS5D01G148300.1 | Wheat | mitochondrion | 28.46 | 69.81 |
| GSMUA_Achr3P30660_001 | Banana | nucleus | 60.0 | 53.06 |
| CDY31052 | Canola | nucleus | 48.21 | 50.27 |
| VIT_18s0001g08360.t01 | Wine grape | nucleus | 51.28 | 49.02 |
| CDY20663 | Canola | nucleus | 47.95 | 48.95 |
| KRH62120 | Soybean | nucleus | 50.77 | 47.83 |
| Bra018465.1-P | Field mustard | nucleus | 45.13 | 47.44 |
| KRH52824 | Soybean | nucleus | 50.26 | 47.34 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 42.56 | 47.16 |
| AT1G10040.1 | Thale cress | nucleus | 48.97 | 46.36 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 41.28 | 45.74 |
| Solyc04g077180.1.1 | Tomato | nucleus | 44.87 | 44.87 |
| TraesCS7D01G281400.3 | Wheat | plastid | 47.18 | 42.59 |
| PGSC0003DMT400012617 | Potato | nucleus | 46.41 | 42.19 |
| TraesCS6D01G329100.1 | Wheat | plastid | 44.36 | 37.94 |
| TraesCS7D01G105700.1 | Wheat | plastid | 36.92 | 33.41 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G057800.2 | EnsemblPlantsGene:TraesCS4D01G057800 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like | InterPro:IPR029058 |
| PANTHER:PTHR12482 | PANTHER:PTHR12482:SF21 | PFAM:PF05057 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4D:-:32761871..32766199
Molecular Weight (calculated)
43693.3 Da
IEP (calculated)
8.389
GRAVY (calculated)
-0.386
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPGKGGEKK GRRRRWLPAA CLPRPGCFTV SGADEGPSGS GSGADEGGGE GGSSRAPTHL IVTVNGIVGS AENWGYAAKH FIRKHPEDVV VHCSGCNSAT
101: RTFDGVDVMG RRLAEEVLSV VKCRPELQKI SFVAHSLGGL IARYAIALLY EPATQTDCHE EYEKDVTDAR SNQPMGQGKI AGLEPMNFIT FATPHLGTRS
201: HKQMPLLRGS YRLEKMAFGM SWLAGRSGKH LFLKDVEDEK PPLLLQMVTD YGDLHFISAL RSFRRCVAYS NVCGDFVVGW KTSSIRRQHE LPKKEDFVDD
301: VRYPHVVYVE KPKVRDVDFS DEMIYQAKTT SEMEEVMLKS LNRIPWERVD VSFKRSRQRI FAHSTIQVKT YFFNSDGADV VFHMIDHFLY
101: RTFDGVDVMG RRLAEEVLSV VKCRPELQKI SFVAHSLGGL IARYAIALLY EPATQTDCHE EYEKDVTDAR SNQPMGQGKI AGLEPMNFIT FATPHLGTRS
201: HKQMPLLRGS YRLEKMAFGM SWLAGRSGKH LFLKDVEDEK PPLLLQMVTD YGDLHFISAL RSFRRCVAYS NVCGDFVVGW KTSSIRRQHE LPKKEDFVDD
301: VRYPHVVYVE KPKVRDVDFS DEMIYQAKTT SEMEEVMLKS LNRIPWERVD VSFKRSRQRI FAHSTIQVKT YFFNSDGADV VFHMIDHFLY
001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.