Factsheet for Solyc04g077180.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012617	Potato	nucleus	91.54	83.22
CDY31052	Canola	nucleus	50.51	52.67
CDY20663	Canola	nucleus	51.28	52.36
VIT_18s0001g08360.t01	Wine grape	nucleus	53.85	51.47
KRH62120	Soybean	nucleus	53.85	50.72
KRH52824	Soybean	nucleus	53.59	50.48
Bra018465.1-P	Field mustard	nucleus	47.69	50.13
AT1G10040.1	Thale cress	nucleus	52.31	49.51
Os03t0726800-01	Rice	cytosol	46.67	47.27
KXG37661	Sorghum	nucleus	45.38	45.85
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	44.87	45.69
TraesCS4D01G057800.2	Wheat	mitochondrion	44.87	44.87
Solyc05g052020.2.1	Tomato	cytosol	41.79	44.78
TraesCS4A01G256900.1	Wheat	nucleus	44.62	44.5
Solyc03g093510.2.1	Tomato	nucleus	40.77	44.04
Solyc07g006690.2.1	Tomato	plastid	49.23	43.64
GSMUA_Achr3P30660_001	Banana	nucleus	48.97	43.31
HORVU4Hr1G009670.6	Barley	cytosol	44.1	41.75
TraesCS5D01G148300.1	Wheat	mitochondrion	14.62	35.85
Solyc11g020720.1.1	Tomato	cytosol	15.9	35.63
Solyc02g076870.2.1	Tomato	plastid	37.69	32.45

Protein Annotations

EnsemblPlants:Solyc04g077180.1.1	EnsemblPlantsGene:Solyc04g077180.1	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689
InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058	PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057
SUPFAM:SSF53474	UniParc:UPI000276625D	UniProt:K4BUF5	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr4:-:62098625..62104485

Molecular Weight (calculated)

43596.1 Da

IEP (calculated)

9.356

GRAVY (calculated)

-0.450

Length

390 amino acids

Sequence
(BLAST)

001: MGSSEMDKGL NFSDEDGVGK RKSEMGIENK ESKKSEMGIG KRNKKTKRKR FSIFPKFSCM RLDDEVPVVE TPADEGGFDV EASQKGPGHA PNHLVVMVNG
101: IIGSVDDWKY AAEQFVKAYP HDIIVYRSQS NYSKLTFDGV DVMGIRLAEE VQSVVKRTPH LQKISFVGHS LGGLVSKKIA GLEPVNFITF ATPHLGCRGH
201: KQAPAFCGLY SLEKVAASSS WLLGRSGRHL FLKDHDEGKP LLLRMASDSE DLPFISALQS FKRRAAYANT SFDYLVGWST SSLRRRSELP KRRNMKKVDK
301: YPHIVNIEEA TSVSSQEETP TMANINGHKS QEMEEAMIRG LTKLSWERVD VSFKGSIQKF LAHTAIQVQS YNINSDGIDV IQHMIDNFAF

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.