CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018465.1-P	Field mustard	nucleus	92.78	93.53
CDY20663	Canola	nucleus	95.19	93.19
AT1G10040.1	Thale cress	nucleus	85.56	77.67
KRH62120	Soybean	nucleus	61.5	55.56
KRH52824	Soybean	nucleus	61.5	55.56
VIT_18s0001g08360.t01	Wine grape	nucleus	60.43	55.39
Solyc04g077180.1.1	Tomato	nucleus	52.67	50.51
Os03t0726800-01	Rice	cytosol	51.34	49.87
CDY05841	Canola	cytosol	44.92	49.56
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	50.27	49.09
KXG37661	Sorghum	nucleus	50.53	48.96
TraesCS4D01G057800.2	Wheat	mitochondrion	50.27	48.21
CDX81158	Canola	cytosol	24.06	47.87
TraesCS4A01G256900.1	Wheat	nucleus	50.0	47.83
PGSC0003DMT400012617	Potato	nucleus	54.81	47.79
CDX71694	Canola	cytosol	44.92	47.59
HORVU4Hr1G009670.6	Barley	cytosol	49.73	45.15
CDY68099	Canola	plastid	48.4	44.69
GSMUA_Achr3P30660_001	Banana	nucleus	52.41	44.44
CDY15650	Canola	cytosol	30.75	44.23
CDX94416	Canola	plastid	48.13	44.01
TraesCS5D01G148300.1	Wheat	mitochondrion	14.97	35.22
CDX90168	Canola	plastid	39.84	33.48
CDY43318	Canola	plastid	39.84	33.41
CDX98042	Canola	cytosol	12.3	15.54

Protein Annotations

EnsemblPlants:CDY31052	EnsemblPlantsGene:GSBRNA2T00047124001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	ProteinID:CDY31052	ProteinID:CDY31052.1	SUPFAM:SSF53474
UniParc:UPI0004EE378B	UniProt:A0A078H0S2	MapMan:35.2	:	:	:

Description

BnaA08g26020DBnaA08g26020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0S2]

Coordinates

chrLK032267:+:54277..57119

Molecular Weight (calculated)

42156.7 Da

IEP (calculated)

9.182

GRAVY (calculated)

-0.486

Length

374 amino acids

Sequence
(BLAST)

001: MEVEEDSKIP GIVEENGHGG SDLTKKKKYW MGCLRAESDE SGNVDLSVDF PGERAEPTHL VVMVNGLIGS AQNWRFAAKQ MLKKYPQDLI VHCSRRNHST
101: QTFDGVDVMG QRLAEEVRMV IKRHPSLQKI SFVGHSLGGL IARYAVACLY EQDLPQNSEE PKERIGGLEP VCFITSATPH LGSRGHKQVP LFSGSRTLEK
201: LATRMSWCLG KTGKHLFLAD GDDGKPPLLL RMVSDRRNLK FISALRCFKR RIAYANISFD HLVGWSTSSI RRRSELPKLQ RGPVNEKYPH IVNVEAPGTS
301: SSNHEEVKSS KNFDMEEEMI RELTKMKWER VDVSFRGTVQ RFLAHNTIQA SVKTKMINSA GADVIQHMID NFEP

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.