CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013918.1-P	Field mustard	plastid	97.04	96.56
CDX94416	Canola	plastid	96.05	95.11
AT4G25770.2	Thale cress	plastid	81.73	78.44
PGSC0003DMT400070685	Potato	cytosol	10.86	72.13
KRH62985	Soybean	plastid	60.25	58.23
KRH54906	Soybean	plastid	60.49	58.19
VIT_11s0052g01660.t01	Wine grape	plastid	54.81	55.09
CDY05841	Canola	cytosol	42.96	51.33
Solyc07g006690.2.1	Tomato	plastid	55.56	51.14
CDX71694	Canola	cytosol	43.46	49.86
CDY20663	Canola	nucleus	45.93	48.69
CDY31052	Canola	nucleus	44.69	48.4
CDY15650	Canola	cytosol	28.89	45.0
CDX81158	Canola	cytosol	17.28	37.23
CDX90168	Canola	plastid	37.78	34.38
CDY43318	Canola	plastid	37.53	34.08
CDX98042	Canola	cytosol	11.36	15.54

Protein Annotations

EnsemblPlants:CDY68099	EnsemblPlantsGene:GSBRNA2T00069244001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	ProteinID:CDY68099	ProteinID:CDY68099.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EE1A82	UniProt:A0A078JMQ0	MapMan:35.2	:	:

Description

BnaAnng26170DBnaAnng26170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMQ0]

Coordinates

chrLK036852:-:1780..4085

Molecular Weight (calculated)

45340.2 Da

IEP (calculated)

8.079

GRAVY (calculated)

-0.340

Length

405 amino acids

Sequence
(BLAST)

001: MIAPFSFSIP DSIPSSPRFL PLGQHQLQLR FLARPKKNLD HMELMKRLGI GCFAAKHSTR EMKTEKDSGG EDLFVESSEK PDHLVVMVNG IIGSSADWKY
101: AAEQFVKKFP DKVLVHRDES NSATLTFDGV DMMGERLANE VLSVIKNRNG LKKISFVAHS LGGLVARYAV GKLYEQSGEA NSSDSPSKAK SGEIAGLEPM
201: NFITFATPHL GSRGHRQFPI LCGLPFLERT ASQTAHLAAG RTGKHLFLVD NDDGNLPLLI RMATDSFNFK FISALNAFKR RVAYANVNFD YMVGWRTSSI
301: RRPNELPKPN LLATDPNYPH IVYVEHGNVD NGSCKSTSTV VKDENTDLEE EMLHGLGQLS WERVDVSFHN SKQRYVAHNT IQVKTYWLHS DGKDVVFHMM
401: DHFCL

Best Arabidopsis Sequence Match ( AT4G25770.1 )
(BLAST)

001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQVKTYW
401: LHSDGKDVVF HMMDHFGL

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.