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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013918.1-P Field mustard plastid 79.15 82.06
CDY68099 Canola plastid 78.44 81.73
CDX94416 Canola plastid 79.15 81.66
GSMUA_Achr9P13600_001 Banana cytosol 48.34 61.63
GSMUA_Achr5P04770_001 Banana cytosol 48.58 59.59
VIT_11s0052g01660.t01 Wine grape plastid 54.03 56.58
KRH62985 Soybean plastid 55.69 56.09
KRH54906 Soybean plastid 55.92 56.06
Os08t0447300-00 Rice plasma membrane 53.79 53.92
KXG25255 Sorghum plastid 54.27 53.88
TraesCS7B01G177600.2 Wheat plastid 52.84 51.62
HORVU7Hr1G060790.8 Barley plastid 52.61 51.39
TraesCS7A01G282700.3 Wheat plastid 52.13 50.93
TraesCS7D01G281400.3 Wheat plastid 52.13 50.93
PGSC0003DMT400070685 Potato cytosol 7.11 49.18
Solyc07g006690.2.1 Tomato plastid 51.18 49.09
AT5G51180.1 Thale cress cytoskeleton, cytosol, nucleus 41.23 48.74
AT1G10040.1 Thale cress nucleus 43.36 44.42
Zm00001d032111_P003 Maize plastid 51.42 41.81
AT1G29120.8 Thale cress plastid 35.55 32.89
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.2EntrezGene:828682InterPro:AB_hydrolaseProteinID:AEE85112.2ArrayExpress:AT4G25770
EnsemblPlantsGene:AT4G25770RefSeq:AT4G25770TAIR:AT4G25770RefSeq:AT4G25770-TAIR-GEnsemblPlants:AT4G25770.2TAIR:AT4G25770.2
InterPro:DUF676_lipase-likeUniProt:F4JTD8GO:GO:0003674GO:GO:0003824GO:GO:0016787InterPro:IPR029058
RefSeq:NP_001320067.1PFAM:PF05057PO:PO:0000005PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020100PO:PO:0025022PO:PO:0025281PANTHER:PTHR12482PANTHER:PTHR12482:SF21
SUPFAM:SSF53474UniParc:UPI00084954EF::::
Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
Coordinates
chr4:-:13117505..13120161
Molecular Weight (calculated)
47111.3 Da
IEP (calculated)
7.663
GRAVY (calculated)
-0.281
Length
422 amino acids
Sequence
(BLAST)
001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQASLMI
401: RTQNSKAILL RAFDIIFPVM CR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.