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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68099 Canola plastid 96.56 97.04
CDX94416 Canola plastid 96.07 95.6
AT4G25770.2 Thale cress plastid 82.06 79.15
PGSC0003DMT400070685 Potato cytosol 10.81 72.13
KRH62985 Soybean plastid 60.2 58.47
KRH54906 Soybean plastid 60.44 58.43
VIT_11s0052g01660.t01 Wine grape plastid 54.55 55.09
Solyc07g006690.2.1 Tomato plastid 55.77 51.59
Bra035731.1-P Field mustard cytosol 43.24 51.46
Bra018465.1-P Field mustard nucleus 42.75 46.9
Bra010851.1-P Field mustard plastid 37.59 34.38
Bra037373.1-P Field mustard cytosol 11.3 14.98
Protein Annotations
EnsemblPlants:Bra013918.1EnsemblPlants:Bra013918.1-PEnsemblPlantsGene:Bra013918Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:DUF676_lipase-like
InterPro:IPR029058PANTHER:PTHR12482PANTHER:PTHR12482:SF21PFAM:PF05057SEG:segSUPFAM:SSF53474
UniParc:UPI0002546A15UniProt:M4DBQ8MapMan:35.2:::
Description
AT4G25770 (E=5e-191) | unknown protein
Coordinates
chrA01:-:8437708..8439723
Molecular Weight (calculated)
45563.4 Da
IEP (calculated)
8.593
GRAVY (calculated)
-0.342
Length
407 amino acids
Sequence
(BLAST)
001: MIASFSTLQI SIPDSIPSSP RFLPLGQHQL QLRFRARHKN LDRMELMKRL GIGCFAAKHS TREVKTEKDS GGEDLFVESS EKPDHLVVMV NGIIGSSADW
101: KYAAEQFVKK FPDKVLVHRS ESNSATLTFD GVDMMGERLA NEVLSVIKNR NGLKKISFVA HSLGGLVARY AVGKLYEKPG EANSSDSPSK AKSGEIAGLE
201: PMNFITFATP HLGSRGHRQF PILCGLPFLE RTASQTAHLA AGRTGKHLFL VDNDDGNLPL LIRMATDSFN FKFISALNAF KRRVAYANVN FDYMVGWRTS
301: SIRRPNELPK PNLLATDPNY PHIVYVEHGD VDNGSCKSTS TVVKDENTDL EEEMLHGLGQ LSWERVDVSF HNSKQRYVAH NTIQVKTYWL HSDGKDVVFH
401: MMDHFCL
Best Arabidopsis Sequence Match ( AT4G25770.1 )
(BLAST)
001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQVKTYW
401: LHSDGKDVVF HMMDHFGL
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.