Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra016705.1-P | |
| Bra019660.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G51180.1 | Bra016705.1-P | AT1G14340.1 | 21798944 |
| AT5G51180.1 | Bra019660.1-P | AT1G14340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05841 | Canola | cytosol | 99.12 | 100.0 |
| AT5G51180.1 | Thale cress | cytoskeleton, cytosol, nucleus | 86.55 | 82.91 |
| PGSC0003DMT400027928 | Potato | nucleus | 69.59 | 66.11 |
| Solyc03g093510.2.1 | Tomato | nucleus | 69.3 | 65.65 |
| GSMUA_Achr5P15490_001 | Banana | cytosol | 61.11 | 64.91 |
| GSMUA_Achr7P06920_001 | Banana | cytosol | 61.11 | 64.71 |
| VIT_16s0013g01410.t01 | Wine grape | cytosol | 65.2 | 64.08 |
| KRG90131 | Soybean | cytosol | 66.67 | 64.04 |
| KRH33381 | Soybean | cytosol | 66.37 | 63.59 |
| GSMUA_Achr4P28970_001 | Banana | cytosol | 65.79 | 63.2 |
| PGSC0003DMT400069125 | Potato | cytosol | 66.96 | 62.91 |
| OQU79861 | Sorghum | cytosol | 64.91 | 62.71 |
| Solyc05g052020.2.1 | Tomato | cytosol | 66.67 | 62.64 |
| GSMUA_Achr2P12000_001 | Banana | cytosol | 62.87 | 62.5 |
| EES05791 | Sorghum | cytosol | 62.87 | 62.32 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 63.45 | 61.65 |
| TraesCS7A01G306200.1 | Wheat | cytosol | 63.45 | 61.47 |
| TraesCS7B01G206400.1 | Wheat | cytosol | 63.16 | 61.19 |
| Zm00001d017470_P001 | Maize | cytosol | 62.28 | 59.83 |
| Os08t0143700-01 | Rice | cytoskeleton, cytosol, nucleus | 60.82 | 59.43 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 60.82 | 59.09 |
| TraesCS6A01G243800.1 | Wheat | cytosol | 59.65 | 58.29 |
| HORVU6Hr1G062800.5 | Barley | cytosol | 60.82 | 58.26 |
| TraesCS6B01G280500.1 | Wheat | cytoskeleton, cytosol, nucleus | 60.23 | 58.19 |
| Zm00001d024645_P001 | Maize | cytosol | 63.45 | 56.36 |
| HORVU7Hr1G072940.6 | Barley | plastid | 59.36 | 50.88 |
| Os02t0655600-01 | Rice | cytosol | 18.71 | 46.38 |
| Bra013918.1-P | Field mustard | plastid | 51.46 | 43.24 |
| Bra018465.1-P | Field mustard | nucleus | 46.49 | 42.86 |
| Bra010851.1-P | Field mustard | plastid | 40.64 | 31.24 |
| Bra037373.1-P | Field mustard | cytosol | 13.45 | 14.98 |
Protein Annotations
| EnsemblPlants:Bra035731.1 | EnsemblPlants:Bra035731.1-P | EnsemblPlantsGene:Bra035731 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like |
| InterPro:IPR029058 | PANTHER:PTHR12482 | PANTHER:PTHR12482:SF14 | PFAM:PF05057 | SUPFAM:SSF53474 | UniParc:UPI0002543C67 |
| UniProt:M4F3T1 | MapMan:35.2 | : | : | : | : |
Description
AT5G51180 (E=1e-113) | unknown protein
Coordinates
chrA04:-:12454592..12456658
Molecular Weight (calculated)
38296.6 Da
IEP (calculated)
6.197
GRAVY (calculated)
-0.269
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKQEEGVCS AESVVDGSLD VWSCKNSAAD HLVVMVHGIL GSTDDWKFGA EQFVKRLPHK LFVHCSEKNA SALTLDGVDV MGERLASEVL EIVETRPNIR
101: KISFVAHSLG GLAARYAIGK LYKPPNLQGP SQGTICGLEA VNFITVATPH LGSMGNRQVP FLFGVSSFEK VAGLVIHWIF KRTGRHLFLK DEEEGKPPLL
201: RRMVEDTGDC HFMSALRAFK RRVVYSNVGH DHIVGWRTAS IRRDSELPKW EDSLDEKYPH IVYEELCKSC DGEDVPEGET HSNDIEEEMI KGLSTVSWEK
301: VDVSFHSSRQ RFAAHSVIQV KSETMHIEGA DVIEHIIDHF HP
101: KISFVAHSLG GLAARYAIGK LYKPPNLQGP SQGTICGLEA VNFITVATPH LGSMGNRQVP FLFGVSSFEK VAGLVIHWIF KRTGRHLFLK DEEEGKPPLL
201: RRMVEDTGDC HFMSALRAFK RRVVYSNVGH DHIVGWRTAS IRRDSELPKW EDSLDEKYPH IVYEELCKSC DGEDVPEGET HSNDIEEEMI KGLSTVSWEK
301: VDVSFHSSRQ RFAAHSVIQV KSETMHIEGA DVIEHIIDHF HP
001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
Arabidopsis Description
AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.