Factsheet for Zm00001d024645_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT5G51180.1	Zm00001d026425_P003	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79861	Sorghum	cytosol	84.16	91.53
TraesCS7A01G306200.1	Wheat	cytosol	72.47	79.04
Os08t0143700-01	Rice	cytoskeleton, cytosol, nucleus	71.69	78.86
TraesCS7B01G206400.1	Wheat	cytosol	72.21	78.75
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	71.95	78.69
CDY05841	Canola	cytosol	56.36	64.01
Bra035731.1-P	Field mustard	cytosol	56.36	63.45
HORVU7Hr1G072940.6	Barley	plastid	65.71	63.41
CDX71694	Canola	cytosol	57.14	62.32
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	57.4	61.9
KRG90131	Soybean	cytosol	55.58	60.11
KRH33381	Soybean	cytosol	55.32	59.66
Solyc03g093510.2.1	Tomato	nucleus	55.58	59.28
PGSC0003DMT400027928	Potato	nucleus	55.32	59.17
Zm00001d017470_P001	Maize	cytosol	54.55	58.99
VIT_16s0013g01410.t01	Wine grape	cytosol	51.95	57.47
PGSC0003DMT400069125	Potato	cytosol	54.29	57.42
Solyc05g052020.2.1	Tomato	cytosol	53.77	56.87
Zm00001d045311_P015	Maize	golgi, mitochondrion	30.39	39.13
Zm00001d018325_P001	Maize	plastid	44.68	37.89
Zm00001d032111_P003	Maize	plastid	43.12	31.98

Protein Annotations

EnsemblPlants:Zm00001d024645_P001	EnsemblPlants:Zm00001d024645_T001	EnsemblPlantsGene:Zm00001d024645	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like
InterPro:IPR029058	PANTHER:PTHR12482	PANTHER:PTHR12482:SF14	PFAM:PF05057	ProteinID:AQK41683.1	SEG:seg
SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI00084570CB	UniProt:A0A1D6J0U3	MapMan:35.2	:

Description

alpha/beta-Hydrolases superfamily protein

Coordinates

chr10:+:82004050..82010075

Molecular Weight (calculated)

42902.2 Da

IEP (calculated)

5.606

GRAVY (calculated)

-0.036

Length

385 amino acids

Sequence
(BLAST)

001: MGGGADRSAP VRAEESVSGG VDVWSDAVSS HAPDHLLVMV HGILGSTADW QYGANEFVKQ LPDHVIVHCS EKNASMLTLD GVDVMGERLA NEVLDVISRR
101: PEITKISFLA HSVGGLAARY AIARLYRHPD SVSDGNTKGT ICGLEGINFI TVATPHLGSR GNKQVPLLFG SVAMEKVACH IVHWIFRRTG RHLFLTDDDE
201: GLPPLLQRMV EDHDDLYFIS ALRAFRRRVV YANADCDRIL IISAVGNFLY GVHVVCFIVV VYFWLCTSLM DKPDIVGWRT SSIRRNNELP ELPVSSSDKY
301: PHIVHEEHSE ETDDDKWQDC MAECDMDVLE EKMVTGLGKV SWEKVDVSFH SSMTSFAAHS IIQVKYAFMN EGADVIQHII DHFQL

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.