Factsheet for Zm00001d017470_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002122_P007
Zm00001d026425_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	Zm00001d002122_P007	AT1G14340.1	21798944
AT5G51180.1	Zm00001d026425_P003	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05791	Sorghum	cytosol	91.29	94.2
TraesCS6A01G243800.1	Wheat	cytosol	80.06	81.43
TraesCS6D01G226000.1	Wheat	cytosol	79.78	80.68
TraesCS6B01G280500.1	Wheat	cytoskeleton, cytosol, nucleus	79.49	79.94
HORVU6Hr1G062800.5	Barley	cytosol	79.78	79.55
GSMUA_Achr5P15490_001	Banana	cytosol	61.52	68.01
CDY05841	Canola	cytosol	59.83	62.83
Bra035731.1-P	Field mustard	cytosol	59.83	62.28
PGSC0003DMT400069125	Potato	cytosol	62.92	61.54
CDX71694	Canola	cytosol	60.11	60.62
PGSC0003DMT400027928	Potato	nucleus	61.24	60.56
Solyc05g052020.2.1	Tomato	cytosol	61.8	60.44
Os02t0655600-01	Rice	cytosol	23.31	60.14
Solyc03g093510.2.1	Tomato	nucleus	60.96	60.11
VIT_16s0013g01410.t01	Wine grape	cytosol	58.71	60.06
KRG90131	Soybean	cytosol	59.83	59.83
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	59.55	59.38
KRH33381	Soybean	cytosol	58.99	58.82
Zm00001d024645_P001	Maize	cytosol	58.99	54.55
Zm00001d018325_P001	Maize	plastid	50.28	39.43
Zm00001d045311_P015	Maize	golgi, mitochondrion	30.34	36.12
Zm00001d032111_P003	Maize	plastid	50.56	34.68

Protein Annotations

EnsemblPlants:Zm00001d017470_P001	EnsemblPlants:Zm00001d017470_T001	EnsemblPlantsGene:Zm00001d017470	EntrezGene:100191604	Gene3D:3.40.50.1820	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058	PANTHER:PTHR12482
PANTHER:PTHR12482:SF37	PFAM:PF05057	ProteinID:AQK73222.1	SUPFAM:SSF53474	UniParc:UPI0008432817	UniProt:A0A1D6HF03
MapMan:35.2	:	:	:	:	:

Description

alpha/beta-Hydrolases superfamily protein

Coordinates

chr5:-:196852395..196857257

Molecular Weight (calculated)

39671.6 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.232

Length

356 amino acids

Sequence
(BLAST)

001: MGDLGGGDWR EAVAEKGLAE ADGGPDHLVI MVHGIVGSTA DWKFGAEQFG KLLSDKVIVH CSNRNMHKLT LDGVDVMGER LAQEVIEEIN RRPYIKKISF
101: VAHSVGGLVA RYAIGRLYKP PKRTSENTPQ TLDDNNIGTI HGLEAVNFIT VASPHLGSRG NKQVPFLFGV TAIENFACYI IHLIFGRTGK HLFLTDNDDG
201: KPPLLQRMVD NWGDLQFMSA LQAFRRRVAY SNVGHDRILT SLLKLACNIV GWRTSSIRKD SELPKWVDST NKIYPHIVYE ELSKAEAPDQ CADTDNCTLE
301: EHLLQGLKRV SWEKVDVSFH NSKVRSAAHS VIQVKDPVMH SEGADVIQHM IDQFIL

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.