CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH69305

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	KRH69305	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33381	Soybean	cytosol	94.38	94.12
VIT_16s0013g01410.t01	Wine grape	cytosol	66.85	68.39
Solyc05g052020.2.1	Tomato	cytosol	69.38	67.86
PGSC0003DMT400069125	Potato	cytosol	69.38	67.86
CDY05841	Canola	cytosol	64.04	67.26
GSMUA_Achr4P28970_001	Banana	cytosol	67.13	67.13
GSMUA_Achr7P06920_001	Banana	cytosol	60.67	66.87
Bra035731.1-P	Field mustard	cytosol	64.04	66.67
CDX71694	Canola	cytosol	65.73	66.29
GSMUA_Achr2P12000_001	Banana	cytosol	64.04	66.28
PGSC0003DMT400027928	Potato	nucleus	66.85	66.11
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	65.73	65.55
Solyc03g093510.2.1	Tomato	nucleus	66.01	65.1
GSMUA_Achr5P15490_001	Banana	cytosol	58.15	64.29
Os08t0143700-01	Rice	cytoskeleton, cytosol, nucleus	62.36	63.43
OQU79861	Sorghum	cytosol	62.08	62.43
TraesCS7A01G306200.1	Wheat	cytosol	61.8	62.32
TraesCS7B01G206400.1	Wheat	cytosol	61.52	62.04
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	61.24	61.93
EES05791	Sorghum	cytosol	59.55	61.45
TraesCS6D01G226000.1	Wheat	cytosol	59.55	60.23
Zm00001d017470_P001	Maize	cytosol	59.83	59.83
TraesCS6A01G243800.1	Wheat	cytosol	58.71	59.71
TraesCS6B01G280500.1	Wheat	cytoskeleton, cytosol, nucleus	58.71	59.04
HORVU6Hr1G062800.5	Barley	cytosol	58.71	58.54
Zm00001d024645_P001	Maize	cytosol	60.11	55.58
HORVU7Hr1G072940.6	Barley	plastid	57.58	51.38
KRH54906	Soybean	plastid	53.09	44.89
KRH62985	Soybean	plastid	52.81	44.87
KRH62120	Soybean	nucleus	47.47	40.82
KRH52824	Soybean	nucleus	47.47	40.82
Os02t0655600-01	Rice	cytosol	15.45	39.86
KRH54734	Soybean	cytosol	9.27	33.0
KRH42854	Soybean	plastid	41.01	32.37
KRH58952	Soybean	plastid	41.29	28.82

Protein Annotations

EntrezGene:100796387	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:ACUP02012553	InterPro:DUF676_lipase-like
EnsemblPlantsGene:GLYMA_20G070200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	InterPro:IPR029058	UniProt:K7N204
EnsemblPlants:KRG90131	ProteinID:KRG90131	ProteinID:KRG90131.1	PFAM:PF05057	PANTHER:PTHR12482	PANTHER:PTHR12482:SF14
SUPFAM:SSF53474	UniParc:UPI000233D990	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:24968630..24975323

Molecular Weight (calculated)

40094.5 Da

IEP (calculated)

5.778

GRAVY (calculated)

-0.325

Length

356 amino acids

Sequence
(BLAST)

001: MEGKEVCASE SAVDGSRDVW SSEPSLASSA DHLVVMVNGI LGRETDWKYA AEKFVKELPD KVFVHCSERN VSMHTLDGVD VMGERLAEEV LEVIKRKPNM
101: RKISFVAHSV GGLVARYAIG RLYRPPEKGS MADSCNDESK EGSVGTIGGL EAMNFIAVAT PHLGSRGNKQ VPFLLGVPAF EKVASCVIHF IFRRTGRHLF
201: LTDDDEGKPP LLERMVQDYG DLYFMSALCA FKRRFAYSNV DYDHIVGWRT SSIRRQSELA NWKDTINEKY PHVVYEEHCK ACSDAEQCDS TEDYSYDKIE
301: EGLVTGLSRV SWEKVDVSFR NSKNRFASHT IIQVKDQITQ IEGADVIQHM IDYFLV

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.