Factsheet for GSMUA_Achr4P28970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P19960_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	GSMUA_Achr3P19960_001	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12000_001	Banana	cytosol	82.87	85.76
GSMUA_Achr7P06920_001	Banana	cytosol	77.53	85.45
GSMUA_Achr5P15490_001	Banana	cytosol	70.22	77.64
KRG90131	Soybean	cytosol	67.13	67.13
KRH33381	Soybean	cytosol	66.57	66.39
VIT_16s0013g01410.t01	Wine grape	cytosol	64.89	66.38
CDY05841	Canola	cytosol	63.2	66.37
Bra035731.1-P	Field mustard	cytosol	63.2	65.79
CDX71694	Canola	cytosol	64.04	64.59
PGSC0003DMT400069125	Potato	cytosol	65.73	64.29
Solyc05g052020.2.1	Tomato	cytosol	65.45	64.01
Solyc03g093510.2.1	Tomato	nucleus	64.33	63.43
PGSC0003DMT400027928	Potato	nucleus	64.04	63.33
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	62.92	62.75
GSMUA_Achr9P13600_001	Banana	cytosol	51.12	54.98
GSMUA_Achr5P04770_001	Banana	cytosol	51.12	52.91
GSMUA_Achr3P30660_001	Banana	nucleus	50.84	41.04
GSMUA_Achr10P...	Banana	cytosol	40.17	33.73

Protein Annotations

EnsemblPlants:GSMUA_Achr4P28970_001	EnsemblPlants:GSMUA_Achr4T28970_001	EnsemblPlantsGene:GSMUA_Achr4G28970_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like
InterPro:IPR029058	PANTHER:PTHR12482	PANTHER:PTHR12482:SF14	PFAM:PF05057	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002965312	UniProt:M0ST09	MapMan:35.2	:	:	:

Description

serine esterase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G28970_001]

Coordinates

chr4:+:27173457..27179247

Molecular Weight (calculated)

39697.4 Da

IEP (calculated)

5.980

GRAVY (calculated)

-0.181

Length

356 amino acids

Sequence
(BLAST)

001: MGDVGGGVCT GESVGGGTDV RSSSGPAAAD HLVVMVHGIL GSTADWKFAA DEFVKMLPDK VIVHCSERNM YGLTLDGVDV MGERLAEEVT EVINKWPDLR
101: RISFIAHSVG GLVARYAIGR LYIPPERKSL EDPLDTVCDD SKRGTICGLQ AMNFITVATP HLGSRGNKQV PFLLGVTAIE KVASCVIHWI FRRTGKHLFL
201: TDNDEGKPPL LQRMVDDCDD LHFMSALQAF KRRVAYSNVG YDHIVGWRTS CIRRTSELPK WEDSFSERYP HIVYEEYSAG SRNDKCPSDS LMNDDCDLLE
301: EKLVTGLTRL SWERVDVSFH NISIQRFAAH SVIQVKDPFM HSEGADVIQH MIDHFL

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.