CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES12950

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	EES12950	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024645_P001	Maize	cytosol	91.53	84.16
TraesCS7A01G306200.1	Wheat	cytosol	82.2	82.44
TraesCS7B01G206400.1	Wheat	cytosol	81.92	82.15
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	81.64	82.1
Os08t0143700-01	Rice	cytoskeleton, cytosol, nucleus	80.51	81.43
HORVU7Hr1G072940.6	Barley	plastid	74.86	66.42
CDY05841	Canola	cytosol	62.71	65.49
Bra035731.1-P	Field mustard	cytosol	62.71	64.91
CDX71694	Canola	cytosol	63.56	63.74
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	63.56	63.03
KRG90131	Soybean	cytosol	62.43	62.08
KRH33381	Soybean	cytosol	62.43	61.9
Solyc03g093510.2.1	Tomato	nucleus	61.86	60.66
PGSC0003DMT400027928	Potato	nucleus	61.58	60.56
EES05791	Sorghum	cytosol	58.76	60.29
VIT_16s0013g01410.t01	Wine grape	cytosol	58.19	59.2
PGSC0003DMT400069125	Potato	cytosol	60.45	58.79
Solyc05g052020.2.1	Tomato	cytosol	60.17	58.52
KXG37661	Sorghum	nucleus	47.74	43.78
KXG25255	Sorghum	plastid	49.72	41.41
KXG31240	Sorghum	plastid	49.72	38.85
KXG19329	Sorghum	plastid	43.5	34.76

Protein Annotations

EnsemblPlants:OQU79861	EnsemblPlantsGene:SORBI_3007G037000	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF14	PFAM:PF05057	ProteinID:KXG24398.1	ProteinID:OQU79861	ProteinID:OQU79861.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI00081ACAFC	UniProt:A0A1B6PFD8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:-:3458786..3467155

Molecular Weight (calculated)

39359.5 Da

IEP (calculated)

5.052

GRAVY (calculated)

-0.239

Length

354 amino acids

Sequence
(BLAST)

001: MGDEGEGEGE GDRSAVRAEE SVSGGVDVWS DAVSSHAPDH LLVMVHGILG STADWQYGAN EFVKQLPDDV IVHCSEKNAS MLTLDGVDVM GERLANEVLD
101: VISRRPELTK ISFLAHSVGG LAARYAIAKL YRHPDSASDG NTKGTICGLE AINFITVATP HLGSRGNKQV PLLFGSVAME KVACRVVHWI FRRTGRHLFL
201: TDDDEGQPPL LQRMVEDHDD LYFISALRAF KRRVVYANAD CDHIVGWRTS SIRRNTELPE LPVSSSEKYP HIVHEEHSEA IDDDKCQDCM TECDMDVLEE
301: KMVTGLRRVS WEKVDVSFHS SMTSFAAHSI IQVKYAFMNE GADVIQHIID HFQL

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.