CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0447300-00	Rice	plasma membrane	86.59	87.41
HORVU7Hr1G060790.8	Barley	plastid	81.41	80.09
TraesCS7B01G177600.2	Wheat	plastid	80.71	79.4
TraesCS7A01G282700.3	Wheat	plastid	80.71	79.4
TraesCS7D01G281400.3	Wheat	plastid	80.47	79.17
GSMUA_Achr9P13600_001	Banana	cytosol	58.59	75.23
Zm00001d032111_P003	Maize	plastid	91.29	74.76
GSMUA_Achr5P04770_001	Banana	cytosol	57.65	71.22
VIT_11s0052g01660.t01	Wine grape	plastid	59.29	62.53
KRH62985	Soybean	plastid	61.41	62.29
KRH54906	Soybean	plastid	60.71	61.28
Solyc07g006690.2.1	Tomato	plastid	56.24	54.32
AT4G25770.2	Thale cress	plastid	53.88	54.27
EES05791	Sorghum	cytosol	43.76	53.91
KXG31240	Sorghum	plastid	55.06	51.66
KXG37661	Sorghum	nucleus	45.18	49.74
OQU79861	Sorghum	cytosol	41.41	49.72
PGSC0003DMT400026438	Potato	cytosol	14.82	36.21
KXG19329	Sorghum	plastid	36.94	35.44
CDX98042	Canola	cytosol	11.76	16.89
Bra037373.1-P	Field mustard	cytosol	11.76	16.29

Protein Annotations

EnsemblPlants:KXG25255	EnsemblPlantsGene:SORBI_3007G145200	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	ProteinID:KXG25255	ProteinID:KXG25255.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI00081ADE58	UniProt:A0A1B6PI42	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr7:-:57521364..57527836

Molecular Weight (calculated)

46991.8 Da

IEP (calculated)

8.786

GRAVY (calculated)

-0.392

Length

425 amino acids

Sequence
(BLAST)

001: MIAAGAASMG RAATPSPGAQ SSSRLPRAVS RLRLVLRSSE AAARSGSERW MGCFRPAPSL ATAAAVKEAK GKRPEVEVEP ARGGGEDVWS ADADAEVAQG
101: GAFPEHLVIM VNGLVGSADD WKFAAEQFVR RMPDKVIVHR SKCNSATQTF DGVDLMGERL ANEVLSVVEQ RRGVKKISFV AHSLGGLVAR YAIGRLYEPN
201: SRSKSSGGRD DVEHLEGHIA GLEPMNFITF ASPHLGSSGN KQLPFLCGLP FLERRASETA HLIVGRTGKH LFLTDNDDGR RPLLLRMVDD SGDLQFRSAL
301: RSFKRRVAYA NANFDHMVGW RTSSIRRQHE LPKHRLLVRD EKYPHIVYVE KEVTDNNGTE AHADLYDPEE EMIRGLTQVP WERVDVSFQK SSQRLVAHNT
401: IQVKSYWLNS DGADVINHMM DNFIV

Best Arabidopsis Sequence Match ( AT4G25770.1 )
(BLAST)

001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQVKTYW
401: LHSDGKDVVF HMMDHFGL

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.