Factsheet for VIT_11s0052g01660.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13600_001	Banana	cytosol	53.6	65.26
KRH62985	Soybean	plastid	64.76	62.29
GSMUA_Achr5P04770_001	Banana	cytosol	52.61	61.63
KRH54906	Soybean	plastid	63.52	60.81
KXG25255	Sorghum	plastid	62.53	59.29
Solyc07g006690.2.1	Tomato	plastid	64.27	58.86
Os08t0447300-00	Rice	plasma membrane	60.3	57.72
CDY68099	Canola	plastid	55.09	54.81
Bra013918.1-P	Field mustard	plastid	55.09	54.55
PGSC0003DMT400070685	Potato	cytosol	8.19	54.1
CDX94416	Canola	plastid	54.84	54.03
AT4G25770.2	Thale cress	plastid	56.58	54.03
HORVU7Hr1G060790.8	Barley	plastid	57.57	53.7
TraesCS7B01G177600.2	Wheat	plastid	57.57	53.7
TraesCS7A01G282700.3	Wheat	plastid	57.07	53.24
TraesCS7D01G281400.3	Wheat	plastid	57.07	53.24
VIT_16s0013g01410.t01	Wine grape	cytosol	44.66	51.72
VIT_18s0001g08360.t01	Wine grape	nucleus	47.89	47.3
Zm00001d032111_P003	Maize	plastid	58.56	45.47
VIT_10s0003g01230.t01	Wine grape	cytosol	36.72	40.11

Protein Annotations

EntrezGene:100246237	wikigene:100246237	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	ProteinID:CCB44597
ProteinID:CCB44597.1	InterPro:DUF676_lipase-like	UniProt:F6GXB1	EMBL:FN594964	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0044255
GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100246237	wikigene:LOC100246237	PFAM:PF05057	PANTHER:PTHR12482
PANTHER:PTHR12482:SF21	SUPFAM:SSF53474	UniParc:UPI000210868D	ArrayExpress:VIT_11s0052g01660	EnsemblPlantsGene:VIT_11s0052g01660	EnsemblPlants:VIT_11s0052g01660.t01
RefSeq:XP_002271414	RefSeq:XP_002271414.2	RefSeq:XP_010656809.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:19412343..19439528

Molecular Weight (calculated)

45149.9 Da

IEP (calculated)

7.786

GRAVY (calculated)

-0.297

Length

403 amino acids

Sequence
(BLAST)

001: MISANSPLAT AVSALATAKS NLAPIPPRGY RNLGFRLSSQ RFGPSEMDLV RKVTRGCFGD RAGKGWMVEV ESMGGEDVFD AVVAAEAKVF PEHLVIMVNG
101: IVGSAADWKY AAEQFVKKLP DKVIVHRSEC NYSTLTFNGV DLMGERLADE VLAVVKRWPE VRKISFVAHS LGGLVARYAV ARLYEPFPKM ESSGLSVNHS
201: VQSLEQPYED RIAGLEPMNF ITFATPHLGS RGHKQLPFLC GLPFLEKRAS QTAHWIAGRS GKHLFLTDSD DGRPPLLLQM VNDSDDLKFI SALRSFKRRV
301: AYANANYDHV VGWSTSSIRR QDELPKINHL VKDEKYPHIV YIERETTDDF HNKASSIAGD QTTDIEEEMI QGLTQVPWER VDVSFHKSRQ RYVAHNTIQT
401: YMP

Best Arabidopsis Sequence Match ( AT4G25770.2 )
(BLAST)

001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQASLMI
401: RTQNSKAILL RAFDIIFPVM CR

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.