Factsheet for VIT_18s0001g08360.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62120	Soybean	nucleus	62.75	61.84
KRH52824	Soybean	nucleus	62.5	61.59
CDY31052	Canola	nucleus	55.39	60.43
CDY20663	Canola	nucleus	56.13	59.95
Bra018465.1-P	Field mustard	nucleus	52.7	57.95
AT1G10040.1	Thale cress	nucleus	57.35	56.8
Solyc04g077180.1.1	Tomato	nucleus	51.47	53.85
Os03t0726800-01	Rice	cytosol	50.25	53.25
KXG37661	Sorghum	nucleus	48.77	51.55
TraesCS4D01G057800.2	Wheat	mitochondrion	49.02	51.28
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	48.04	51.17
TraesCS4A01G256900.1	Wheat	nucleus	48.77	50.9
PGSC0003DMT400012617	Potato	nucleus	53.19	50.58
GSMUA_Achr3P30660_001	Banana	nucleus	52.94	48.98
VIT_16s0013g01410.t01	Wine grape	cytosol	41.42	48.56
VIT_11s0052g01660.t01	Wine grape	plastid	47.3	47.89
HORVU4Hr1G009670.6	Barley	cytosol	47.79	47.33
VIT_10s0003g01230.t01	Wine grape	cytosol	33.82	37.4
TraesCS5D01G148300.1	Wheat	mitochondrion	14.22	36.48

Protein Annotations

EntrezGene:100243673	wikigene:100243673	EntrezGene:104882510	MapMan:35.2	InterPro:AB_hydrolase	EMBL:AM424396
ProteinID:CAN62371	ProteinID:CAN62371.1	ProteinID:CBI19341	ProteinID:CBI19341.3	InterPro:DUF676_lipase-like	UniProt:E0CNW3
EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100243673
wikigene:LOC100243673	PFAM:PF05057	PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	SUPFAM:SSF53474	UniParc:UPI00015C75AB
ArrayExpress:VIT_18s0001g08360	EnsemblPlantsGene:VIT_18s0001g08360	EnsemblPlants:VIT_18s0001g08360.t01	RefSeq:XP_002283560	RefSeq:XP_002283560.1	SEG:seg

Description

No Description!

Coordinates

chr18:-:6843147..6848958

Molecular Weight (calculated)

46235.3 Da

IEP (calculated)

9.661

GRAVY (calculated)

-0.574

Length

408 amino acids

Sequence
(BLAST)

001: MASLELRTSS ETADEAGYGR RSSNGKDEIK ESRKIRKRRA KYVPKFGCFR SEHDEGLEME ADCTGEPSNP THLVITVNGL IGSAQNWKFA AKQLLKKYPK
101: DVIVHCSKAN YSMSTFDGVD VMGNRLAEEV LLVIKRYPDV QKISFIGHSL GGLVARYAIA RLYERDATGE LSQENGDKKN DRSGDSYLQE KLKGKIAGLE
201: PMNFITSATP HLGSRGHKQV PVFCGFYTLE KAASHTSWLF GRSGKHLFLT DCDNGKPPLL LQMAGDCEDL KFMSALQSFR RRVAYANARF DHIVGWSTSS
301: IRHRNELPKR QHFARNEKYP HIVNEEVTKI SSPQQEVPLK VKGNGRKSID MEEEMIRGLM KVSWERIDVN FKRSTQRFLA HNTIQVKNYC INSDGKDVIL
401: HMVDNFLL

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.