Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G057600.2 | Wheat | cytosol, mitochondrion | 95.65 | 97.65 |
| TraesCS4D01G057800.2 | Wheat | mitochondrion | 96.93 | 97.18 |
| HORVU4Hr1G009670.6 | Barley | cytosol | 93.86 | 89.08 |
| Os03t0726800-01 | Rice | cytosol | 79.28 | 80.52 |
| KXG37661 | Sorghum | nucleus | 76.73 | 77.72 |
| GSMUA_Achr3P30660_001 | Banana | nucleus | 60.61 | 53.74 |
| CDY31052 | Canola | nucleus | 47.83 | 50.0 |
| VIT_18s0001g08360.t01 | Wine grape | nucleus | 50.9 | 48.77 |
| CDY20663 | Canola | nucleus | 47.57 | 48.69 |
| KRH62120 | Soybean | nucleus | 50.64 | 47.83 |
| KRH52824 | Soybean | nucleus | 50.13 | 47.34 |
| TraesCS7A01G306200.1 | Wheat | cytosol | 42.71 | 47.31 |
| Bra018465.1-P | Field mustard | nucleus | 44.76 | 47.17 |
| TraesCS6A01G243800.1 | Wheat | cytosol | 41.43 | 46.29 |
| AT1G10040.1 | Thale cress | nucleus | 48.59 | 46.12 |
| Solyc04g077180.1.1 | Tomato | nucleus | 44.5 | 44.62 |
| TraesCS7A01G282700.3 | Wheat | plastid | 47.31 | 42.82 |
| PGSC0003DMT400012617 | Potato | nucleus | 46.04 | 41.96 |
| TraesCS6A01G346200.1 | Wheat | plastid | 44.25 | 37.94 |
| TraesCS7A01G110400.1 | Wheat | plastid | 36.57 | 33.1 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G256900.1 | EnsemblPlantsGene:TraesCS4A01G256900 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like | InterPro:IPR029058 |
| PANTHER:PTHR12482 | PANTHER:PTHR12482:SF21 | PFAM:PF05057 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4A:+:569869977..569874614
Molecular Weight (calculated)
43923.4 Da
IEP (calculated)
8.042
GRAVY (calculated)
-0.402
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGEGGEKK GRRRRRWLPA ACLPRPGCFT VSAADEGPSG SGSGADEGGG DGASRRAPTH LIVTVNGIVG SAENWGYAAK HFIRKHPEDV VVHCSGCNSA
101: TRTFDGVDVM GRRLAEEVIS VVECRPELQK ISFVAHSLGG LIARYAIALL YEPTTQTDCH EEYEKDVNDA RSNQPMGQGK IAGLEPMNFI TFATPHLGTR
201: SHKQMPLLRG SYRLEKMAFG MSWLAGRSGK HLFLKDVEDE KPPLLLQMVT DYGDLHFISA LRSFRRCVAY SNVCGDFVVG WKTSSIRRQH ELPKKEDFVD
301: DVRYPHVVYV EKPKARDVDF SDEMIYQAKT TSEMEEVMLK SLNRIPWERV DVSFKRSRQR IFAHSTIQVK TYFFNSDGAD VVFHMIDHFL Y
101: TRTFDGVDVM GRRLAEEVIS VVECRPELQK ISFVAHSLGG LIARYAIALL YEPTTQTDCH EEYEKDVNDA RSNQPMGQGK IAGLEPMNFI TFATPHLGTR
201: SHKQMPLLRG SYRLEKMAFG MSWLAGRSGK HLFLKDVEDE KPPLLLQMVT DYGDLHFISA LRSFRRCVAY SNVCGDFVVG WKTSSIRRQH ELPKKEDFVD
301: DVRYPHVVYV EKPKARDVDF SDEMIYQAKT TSEMEEVMLK SLNRIPWERV DVSFKRSRQR IFAHSTIQVK TYFFNSDGAD VVFHMIDHFL Y
001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.