CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31052	Canola	nucleus	93.19	95.19
AT1G10040.1	Thale cress	nucleus	84.82	78.64
VIT_18s0001g08360.t01	Wine grape	nucleus	59.95	56.13
KRH62120	Soybean	nucleus	60.73	56.04
KRH52824	Soybean	nucleus	60.21	55.56
Solyc04g077180.1.1	Tomato	nucleus	52.36	51.28
CDY05841	Canola	cytosol	44.24	49.85
KXG37661	Sorghum	nucleus	50.0	49.48
Os03t0726800-01	Rice	cytosol	49.74	49.35
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	48.95	48.83
PGSC0003DMT400012617	Potato	nucleus	54.45	48.48
TraesCS4D01G057800.2	Wheat	mitochondrion	48.95	47.95
CDX71694	Canola	cytosol	43.98	47.59
TraesCS4A01G256900.1	Wheat	nucleus	48.69	47.57
CDX81158	Canola	cytosol	23.3	47.34
CDY68099	Canola	plastid	48.69	45.93
GSMUA_Achr3P30660_001	Banana	nucleus	52.09	45.12
CDX94416	Canola	plastid	48.17	44.99
HORVU4Hr1G009670.6	Barley	cytosol	48.43	44.9
CDY15650	Canola	cytosol	30.1	44.23
TraesCS5D01G148300.1	Wheat	mitochondrion	14.66	35.22
CDX90168	Canola	plastid	39.01	33.48
CDY43318	Canola	plastid	39.01	33.41
CDX98042	Canola	cytosol	12.3	15.88

Protein Annotations

EnsemblPlants:CDY20663	EnsemblPlantsGene:GSBRNA2T00012848001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	ProteinID:CDY20663	ProteinID:CDY20663.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EEEF02	UniProt:A0A078G7R9	MapMan:35.2	:	:

Description

BnaC08g13950DBnaC08g13950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7R9]

Coordinates

chrLK032110:+:523880..526687

Molecular Weight (calculated)

43069.4 Da

IEP (calculated)

8.981

GRAVY (calculated)

-0.560

Length

382 amino acids

Sequence
(BLAST)

001: MEVEEDSKIP RIVKEDGHGG SDLTKKKKKK YWMGCLRAES DESGNVDLSV DFPGERSEPS HLVVMVNGLI GSAQNWRFAA KQMLKKYPQD LIVHCDRRNH
101: STQTFDGVDV MGQRLAEEVR TVIKRHPSLQ KISFVGHSLG GLIARYAVAC LYEQESPQNS EEPKERIAGL EPVCFITSAT PHLGSRGHKQ VPLFSGSHTL
201: EKLATRMSWC LGKTGKHLFL ADGDDDGKPP LLLRMVSDRR NLKFISALRC FKRRIAYANT SFDHLVGWST SSIRRRSELP KLQRGPVNEK YPHIVNVEGP
301: STSSNHEEVR SVTDSNGSKN FDMEEEMIRE LTKMSWERVD VSFRGTVQRF LAHNTIQASV KTKLINSAGA DVIQHMIDNF EP

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.