CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010851.1-P	Field mustard	plastid	99.78	99.78
CDY43318	Canola	plastid	97.75	97.53
AT1G29120.8	Thale cress	plastid	90.34	88.16
CDY15650	Canola	cytosol	48.76	83.46
VIT_10s0003g01230.t01	Wine grape	cytosol	63.15	76.15
KRH42854	Soybean	plastid	67.42	66.52
Zm00001d045311_P015	Maize	golgi, mitochondrion	43.15	64.21
Solyc02g076870.2.1	Tomato	plastid	64.49	63.36
PGSC0003DMT400026437	Potato	cytosol	25.62	60.64
KRH58952	Soybean	plastid	65.84	57.45
TraesCS7D01G105700.1	Wheat	plastid	55.28	57.08
TraesCS7B01G008200.1	Wheat	plastid	55.06	56.84
KXG19329	Sorghum	plastid	56.4	56.66
TraesCS7A01G110400.1	Wheat	plastid	54.61	56.25
GSMUA_Achr10P...	Banana	cytosol	53.26	55.9
Os06t0154400-01	Rice	cytosol, nucleus, plastid	21.8	50.26
HORVU7Hr1G023560.21	Barley	nucleus	54.16	45.99
CDY05841	Canola	cytosol	31.24	41.0
CDY31052	Canola	nucleus	33.48	39.84
CDX71694	Canola	cytosol	31.46	39.66
CDY20663	Canola	nucleus	33.48	39.01
CDY68099	Canola	plastid	34.38	37.78
CDX94416	Canola	plastid	34.16	37.16
CDX81158	Canola	cytosol	14.16	33.51
CDX98042	Canola	cytosol	11.01	16.55

Protein Annotations

EnsemblPlants:CDX90168	EnsemblPlantsGene:GSBRNA2T00150714001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF11	PFAM:PF05057	ProteinID:CDX90168	ProteinID:CDX90168.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EDD843	MapMan:35.2	:	:	:

Description

BnaA08g18160D

Coordinates

chrLK031862:+:451298..454589

Molecular Weight (calculated)

48813.3 Da

IEP (calculated)

9.862

GRAVY (calculated)

-0.228

Length

445 amino acids

Sequence
(BLAST)

001: MSTASWIQPP CRYYSPDRRG GGFAKPSCSR ARQFPGVVSS SSCSCGYSEI LNFDFGSSRS WNHQGLRVQA MSATAQRKFS LSKGDADEKV EPDHLLVLVH
101: GILASPSDWL YVEAEMKRRL GRRFLIYASS SNTFTKTFGG IDGAGKRLAE EVRQVIQKSK SLKKISFLAH SLGGLFARHA VAVLYSAAAS DGAAVSNSGN
201: SHLPRGLLAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LERLAAPLAP FVVGRTGSQL FLTDGKADKP PLLLRMASDC EDLKFLSSLG SFRSRIVYAN
301: VSYDHMVGWR TSSIRRETEL FKPPRRSLDG YKHVVDVEYC PPVSSDGAHF PPEAAKAKEA AQSSPSPQNT LEYHEIVEDE MIRGLQTLGW KKVDVSFHST
401: FWPYLAHNNI HVKSERLYKA GAGVVAHVAD SIKQQETSTF ITASL

Best Arabidopsis Sequence Match ( AT1G29120.1 )
(BLAST)

001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFGSNRSWN QQGRRVQAMS STAQRKFSLS KGDSDDKNEP
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDHMVGWR TSSIRRETEL IKPSRRSLDG YKHVVDVEYC PPVSSDGAHF PPEAAKAKEA AQSSPSPQNT LEYHEIVEEE MIRGLQRLGW
401: KKVDVSFHST FWPYLAHNNI HVKSERLYKA GAGVIAHVAD SIKQQESSTF ITASL

Arabidopsis Description

AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.