CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90168	Canola	plastid	97.53	97.75
Bra010851.1-P	Field mustard	plastid	97.31	97.53
AT1G29120.8	Thale cress	plastid	90.13	88.16
CDY15650	Canola	cytosol	48.88	83.85
VIT_10s0003g01230.t01	Wine grape	cytosol	63.45	76.69
KRH42854	Soybean	plastid	67.26	66.52
Zm00001d045311_P015	Maize	golgi, mitochondrion	43.27	64.55
Solyc02g076870.2.1	Tomato	plastid	64.35	63.36
PGSC0003DMT400026437	Potato	cytosol	25.78	61.17
TraesCS7B01G008200.1	Wheat	plastid	55.38	57.31
KRH58952	Soybean	plastid	65.47	57.25
TraesCS7D01G105700.1	Wheat	plastid	55.16	57.08
KXG19329	Sorghum	plastid	56.5	56.88
TraesCS7A01G110400.1	Wheat	plastid	54.93	56.71
GSMUA_Achr10P...	Banana	cytosol	53.14	55.9
Os06t0154400-01	Rice	cytosol, nucleus, plastid	22.2	51.3
HORVU7Hr1G023560.21	Barley	nucleus	54.04	45.99
CDY05841	Canola	cytosol	31.17	41.0
CDY31052	Canola	nucleus	33.41	39.84
CDX71694	Canola	cytosol	31.39	39.66
CDY20663	Canola	nucleus	33.41	39.01
CDY68099	Canola	plastid	34.08	37.53
CDX94416	Canola	plastid	34.08	37.16
CDX81158	Canola	cytosol	14.13	33.51
CDX98042	Canola	cytosol	10.99	16.55

Protein Annotations

EnsemblPlants:CDY43318	EnsemblPlantsGene:GSBRNA2T00076366001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF11	PFAM:PF05057	ProteinID:CDY43318	ProteinID:CDY43318.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EF0557	UniProt:A0A078I2F8	MapMan:35.2	:	:

Description

BnaC03g58900DBnaC03g58900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2F8]

Coordinates

chrLK032552:+:65054..68633

Molecular Weight (calculated)

48823.3 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.205

Length

446 amino acids

Sequence
(BLAST)

001: MSTASWIQPP CRFLPDRGGG GFAKSSLSRT RQFPGVVSSS SCSCGYSEIL NFDFGSSRSW NHQGLRVQAM SATAQRKFSL SKGDADEKIE PDHLLVLVHG
101: ILASPSDWLY VEAEMKRRLG RRFLIYASSS NTFTKTFGGI DGAGKRLAEE VRQVIQKSKS LKKISFLAHS LGGLFARHAV AVLYSAATSQ ASDGAVSSSG
201: NSHLPRGLLA GLEPINFITL ATPHLGVRGR KQLPFLLGVP ILERLAAPLA PFVVGRTGSQ LFLTDGKADK PPLLLRMASD CEDLKFLSSL GSFRSRIVYA
301: NVSYDHMVGW RTSSIRRETE LFKPPRRSLD GYKHVVDVEY CPPVSSDGAH FPPEAAKAKE AAQSSPSPQN TLEYHEIVED EMIRGLQTLG WKKVDVSFHS
401: TFWPYLAHNN IHVKSERLYK AGAGVVAHVA DSIKQQETST FITASL

Best Arabidopsis Sequence Match ( AT1G29120.1 )
(BLAST)

001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFGSNRSWN QQGRRVQAMS STAQRKFSLS KGDSDDKNEP
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDHMVGWR TSSIRRETEL IKPSRRSLDG YKHVVDVEYC PPVSSDGAHF PPEAAKAKEA AQSSPSPQNT LEYHEIVEEE MIRGLQRLGW
401: KKVDVSFHST FWPYLAHNNI HVKSERLYKA GAGVIAHVAD SIKQQESSTF ITASL

Arabidopsis Description

AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.