Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0154400-01 | Rice | cytosol, nucleus, plastid | 52.13 | 50.78 |
| CDY15650 | Canola | cytosol | 55.32 | 40.0 |
| Solyc02g076870.2.1 | Tomato | plastid | 88.3 | 36.64 |
| VIT_10s0003g01230.t01 | Wine grape | cytosol | 57.98 | 29.54 |
| CDY43318 | Canola | plastid | 61.17 | 25.78 |
| KRH42854 | Soybean | plastid | 61.7 | 25.72 |
| Bra010851.1-P | Field mustard | plastid | 60.64 | 25.62 |
| CDX90168 | Canola | plastid | 60.64 | 25.62 |
| AT1G29120.8 | Thale cress | plastid | 61.17 | 25.22 |
| GSMUA_Achr10P... | Banana | cytosol | 52.66 | 23.35 |
| TraesCS7B01G008200.1 | Wheat | plastid | 53.19 | 23.2 |
| TraesCS7D01G105700.1 | Wheat | plastid | 53.19 | 23.2 |
| TraesCS7A01G110400.1 | Wheat | plastid | 53.19 | 23.15 |
| KXG19329 | Sorghum | plastid | 53.72 | 22.8 |
| KRH58952 | Soybean | plastid | 58.51 | 21.57 |
| HORVU7Hr1G023560.21 | Barley | nucleus | 52.13 | 18.7 |
| PGSC0003DMT400069125 | Potato | cytosol | 36.17 | 18.68 |
| PGSC0003DMT400027928 | Potato | nucleus | 35.64 | 18.61 |
| Zm00001d045311_P015 | Maize | golgi, mitochondrion | 27.66 | 17.39 |
| PGSC0003DMT400012617 | Potato | nucleus | 36.7 | 16.08 |
| PGSC0003DMT400026438 | Potato | cytosol | 3.72 | 4.02 |
| PGSC0003DMT400070685 | Potato | cytosol | 0.53 | 1.64 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026437 | EnsemblPlantsGene:PGSC0003DMG401010200 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like | InterPro:IPR029058 | PANTHER:PTHR12482 |
| PANTHER:PTHR12482:SF11 | PFAM:PF05057 | PGSC:PGSC0003DMG401010200 | SUPFAM:SSF53474 | UniParc:UPI00029693F2 | UniProt:M1AN56 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401010200]
Coordinates
chr2:+:32214180..32220265
Molecular Weight (calculated)
20248.4 Da
IEP (calculated)
8.478
GRAVY (calculated)
-0.032
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTTEGSVMS PKVLTDTGDE PEHLLVLVHG ILASPSDWTY VQAELRRRLG RNFLIYASSC NTFTKTFTGI DGAGKRLADE VRLVVKKKES LKKISFLAHS
101: LGGLIARYAL GELYSSDNCN EQSNDAVTST SANLKPVGSL DIGLIAGLEP VNFITLATPH LGVRGKNQVC SHGTILSLMH QKSYLSVS
101: LGGLIARYAL GELYSSDNCN EQSNDAVTST SANLKPVGSL DIGLIAGLEP VNFITLATPH LGVRGKNQVC SHGTILSLMH QKSYLSVS
001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFGSNRSWN QQGRRVQAMS STAQRKFSLS KGDSDDKNEP
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDRILCIS VAV
101: DHLLVLVHGI LASPSDWLYV EAELKRRLGR RFLIYASSSN TFTKTFGGID GAGKRLAEEV RQVVQKSKSL KKISFLAHSL GGLFSRHAVA VLYSAAMAQV
201: SDVAVSQSGN SNLLRGRIAG LEPINFITLA TPHLGVRGRK QLPFLLGVPI LEKLAAPIAP FFVGRTGSQL FLTDGKADKP PLLLRMASDG EDLKFLSALG
301: AFRSRIIYAN VSYDRILCIS VAV
Arabidopsis Description
AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.