Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400070685 | Potato | cytosol | 14.94 | 42.62 |
| GSMUA_Achr9P13600_001 | Banana | cytosol | 36.21 | 19.03 |
| GSMUA_Achr5P04770_001 | Banana | cytosol | 36.78 | 18.6 |
| PGSC0003DMT400069125 | Potato | cytosol | 35.06 | 16.76 |
| PGSC0003DMT400027928 | Potato | nucleus | 34.48 | 16.67 |
| Os08t0447300-00 | Rice | plasma membrane | 37.36 | 15.44 |
| KXG25255 | Sorghum | plastid | 36.21 | 14.82 |
| TraesCS7A01G282700.3 | Wheat | plastid | 36.21 | 14.58 |
| HORVU7Hr1G060790.8 | Barley | plastid | 35.63 | 14.35 |
| TraesCS7B01G177600.2 | Wheat | plastid | 35.63 | 14.35 |
| TraesCS7D01G281400.3 | Wheat | plastid | 35.63 | 14.35 |
| PGSC0003DMT400012617 | Potato | nucleus | 33.91 | 13.75 |
| Zm00001d032111_P003 | Maize | plastid | 31.61 | 10.6 |
| Bra037373.1-P | Field mustard | cytosol | 14.37 | 8.14 |
| CDX98042 | Canola | cytosol | 13.79 | 8.11 |
| PGSC0003DMT400026437 | Potato | cytosol | 4.02 | 3.72 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026438 | EnsemblPlantsGene:PGSC0003DMG402010200 | PANTHER:PTHR12482 | PANTHER:PTHR12482:SF11 | PGSC:PGSC0003DMG402010200 | SEG:seg |
| UniParc:UPI00029520F4 | UniProt:M1AN57 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402010200]
Coordinates
chr2:+:32221444..32225560
Molecular Weight (calculated)
19754.4 Da
IEP (calculated)
7.344
GRAVY (calculated)
-0.450
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDCDDGKF ISALGAFKWR VLYANVSYDH MVGWRTSSIR RVTELVKPPW RSLDGYKHVV DVEYCPPASC EGPHYPLEAA KAKEAAQNAP STQRTLKYHE
101: SMEEEMIRGL QQLGWKKIDV SFHSAFWPFF AHNNIHVKNE FFHNAGVGVI AHVADHIKQQ EKQPESSSLI TPSL
101: SMEEEMIRGL QQLGWKKIDV SFHSAFWPFF AHNNIHVKNE FFHNAGVGVI AHVADHIKQQ EKQPESSSLI TPSL
001: MSTASSWIQQ PPFRYLPDRG GFSKPSSRSA RQFSSGVVSA SASSPSPSSS CSCGYSEILN FDFEGSNRSW NQQGRRVQAM SSTAQRKFSL SKGDSDDKNE
101: PDHLLVLVHG ILASPSDWLY VEAELKRRLG RRFLIYASSS NTFTKTFGGI DGAGKRLAEE VRQVVQKSKS LKKISFLAHS LGGLFSRHAV AVLYSAAMAQ
201: VSDVAVSQSG NSNLLRGRIA GLEPINFITL ATPHLGVRGR KQLPFLLGVP ILEKLAAPIA PFFVGRTGSQ LFLTDGKADK PPLLLRMASD GEDLKFLSAL
301: GAFRSRIIYA NVSYDHMVGW RTSSIRRETE LIKPSRRSLD GYKHVVDVEY CPPVSSDGAH FPPEAAKAKE AAQSSPSPQN TLEYHEIVEE EMIRGLQRLG
401: WKKVDVSFHS TFWPYLAHNN IHVKSERLYK AGAGVIAHVA DSIKQQESST FITASL
101: PDHLLVLVHG ILASPSDWLY VEAELKRRLG RRFLIYASSS NTFTKTFGGI DGAGKRLAEE VRQVVQKSKS LKKISFLAHS LGGLFSRHAV AVLYSAAMAQ
201: VSDVAVSQSG NSNLLRGRIA GLEPINFITL ATPHLGVRGR KQLPFLLGVP ILEKLAAPIA PFFVGRTGSQ LFLTDGKADK PPLLLRMASD GEDLKFLSAL
301: GAFRSRIIYA NVSYDHMVGW RTSSIRRETE LIKPSRRSLD GYKHVVDVEY CPPVSSDGAH FPPEAAKAKE AAQSSPSPQN TLEYHEIVEE EMIRGLQRLG
401: WKKVDVSFHS TFWPYLAHNN IHVKSERLYK AGAGVIAHVA DSIKQQESST FITASL
Arabidopsis Description
AT1G29120 protein [Source:UniProtKB/TrEMBL;Acc:C0Z2A9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.