Factsheet for TraesCS6A01G243800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G521600.1
TraesCS2B01G551100.1
TraesCS2D01G523400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	TraesCS2A01G521600.1	AT1G14340.1	21798944
AT5G51180.1	TraesCS2B01G551100.1	AT1G14340.1	21798944
AT5G51180.1	TraesCS2D01G523400.1	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G280500.1	Wheat	cytoskeleton, cytosol, nucleus	97.14	96.05
TraesCS6D01G226000.1	Wheat	cytosol	96.29	95.74
HORVU6Hr1G062800.5	Barley	cytosol	93.43	91.6
EES05791	Sorghum	cytosol	79.71	80.87
Zm00001d017470_P001	Maize	cytosol	81.43	80.06
GSMUA_Achr5P15490_001	Banana	cytosol	62.29	67.7
CDY05841	Canola	cytosol	58.29	60.18
Bra035731.1-P	Field mustard	cytosol	58.29	59.65
PGSC0003DMT400069125	Potato	cytosol	61.43	59.07
CDX71694	Canola	cytosol	59.43	58.92
Solyc03g093510.2.1	Tomato	nucleus	60.57	58.73
KRG90131	Soybean	cytosol	59.71	58.71
TraesCS7A01G306200.1	Wheat	cytosol	59.14	58.64
PGSC0003DMT400027928	Potato	nucleus	60.0	58.33
VIT_16s0013g01410.t01	Wine grape	cytosol	58.0	58.33
KRH33381	Soybean	cytosol	59.43	58.26
Solyc05g052020.2.1	Tomato	cytosol	60.29	57.97
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	58.86	57.7
Os02t0655600-01	Rice	cytosol	22.29	56.52
TraesCS4A01G256900.1	Wheat	nucleus	46.29	41.43
TraesCS7A01G282700.3	Wheat	plastid	48.0	38.89
TraesCS6A01G346200.1	Wheat	plastid	47.14	36.18
TraesCS7A01G110400.1	Wheat	plastid	43.71	35.42

Protein Annotations

EnsemblPlants:TraesCS6A01G243800.1	EnsemblPlantsGene:TraesCS6A01G243800	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF37	PFAM:PF05057	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr6A:-:455046984..455050207

Molecular Weight (calculated)

38812.4 Da

IEP (calculated)

6.756

GRAVY (calculated)

-0.215

Length

350 amino acids

Sequence
(BLAST)

001: MGDLAGRDCR EEAAAPAPAP AVGGPDHLVI MVHGIVGSTA DWKYGAEQFH KLLEDRVIVH CSNSNMHKLT LDGIDVMGER LAQEVIEEIN KRPQITKISF
101: VAHSVGGLVA RYAIGRLYRP PGQSLENSPQ SLTDSNRGNI HGLDAVNFIT VASPHLGSRG NKQVPFLFGV TAIEKFACCI IHFIFRRTGK HLFLTDNDDG
201: KPPLLQLMVD DCEDLRFISA LQAFQRRVAY SNVGYDHIVG WRTSSIRGAS ELPKWVDSTS KIYPHIVYEE LSKAETLDQC ADVADMDKDN CTLEERLLRG
301: LKRVSWEKVD VSFHNSKARS AAHSVIQVKD PVVHSEGADV IKHMIDHFVT

Best Arabidopsis Sequence Match ( AT1G10040.1 )
(BLAST)

001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.