Factsheet for Solyc07g006690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070685	Potato	cytosol	13.86	100.0
GSMUA_Achr9P13600_001	Banana	cytosol	50.45	67.07
KRH62985	Soybean	plastid	62.05	65.16
VIT_11s0052g01660.t01	Wine grape	plastid	58.86	64.27
KRH54906	Soybean	plastid	60.45	63.18
GSMUA_Achr5P04770_001	Banana	cytosol	48.64	62.21
KXG25255	Sorghum	plastid	54.32	56.24
Bra013918.1-P	Field mustard	plastid	51.59	55.77
Os08t0447300-00	Rice	plasma membrane	53.18	55.58
CDY68099	Canola	plastid	51.14	55.56
CDX94416	Canola	plastid	51.59	55.5
HORVU7Hr1G060790.8	Barley	plastid	52.27	53.24
TraesCS7B01G177600.2	Wheat	plastid	52.05	53.01
Solyc03g093510.2.1	Tomato	nucleus	43.18	52.63
TraesCS7A01G282700.3	Wheat	plastid	51.59	52.55
TraesCS7D01G281400.3	Wheat	plastid	51.59	52.55
Solyc05g052020.2.1	Tomato	cytosol	43.18	52.2
AT4G25770.2	Thale cress	plastid	49.09	51.18
Solyc04g077180.1.1	Tomato	nucleus	43.64	49.23
Zm00001d032111_P003	Maize	plastid	51.36	43.55
Solyc11g020720.1.1	Tomato	cytosol	14.32	36.21
Solyc02g076870.2.1	Tomato	plastid	36.59	35.54

Protein Annotations

EnsemblPlants:Solyc07g006690.2.1	EnsemblPlantsGene:Solyc07g006690.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689	InterPro:AB_hydrolase
InterPro:DUF676_lipase-like	InterPro:IPR029058	PANTHER:PTHR12482	PANTHER:PTHR12482:SF21	PFAM:PF05057	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000276C7A6	UniProt:K4CBE0	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7:-:1547767..1557882

Molecular Weight (calculated)

49795.0 Da

IEP (calculated)

8.805

GRAVY (calculated)

-0.390

Length

440 amino acids

Sequence
(BLAST)

001: MITKIKQPFK PKIPISITTS VPQLSGSVLS FFSKSKSRFD NKGVNNCRLL WVDEKGEMEL LRKLSRGCFR NSLKKGQKVK IESVNDGEDV FDAASARAKL
101: QPEHLVVMVN GLVGSSADWR YAAEQFVKRL PEKIVVHCSE CNYSMLTFDG VDRMGERLAK EVEDVIKRWP GVRKISFVAH SLGGLVARYA IGRLYEPPVQ
201: TEVAGLNRSC LVREENVSDQ CHKQSSEETV AGLEPVNFIT VATPHLGSRG HKQLPLLCGL PLLEKGALQT AHWIAGRSGK HLFLTDKDNG KPPLLLRMVN
301: DSDDLMFMSG LRSFKRRVAY ANANYDHVVG WRTSSIRRQD ELPKSNLQIK DQKYPHIVNV EQETTLDINH KLSSLEGKKM ADLEEEMIEG LTQVPWERID
401: VSFHESRQRY VAHNTIQVKT YWLNSDGADV IEHMIDNFLL

Best Arabidopsis Sequence Match ( AT4G25770.1 )
(BLAST)

001: MIASFSRFQI SIPDLIPSSP RFLPPSQNQF RFRLYLQFPA QPKNLCQMEW MNRLGIGCFA ANRSKRELTT EIDNGGEDFF DADVMESAEK PDHLVVMVNG
101: IVGSAADWKY AAEQFVKKFP DKVLVHRSES NSATLTFDGV DKMGERLANE VLGVVKHRSG LKKISFVAHS LGGLVARYAI GKLYEQPGEV DSLDSPSKEK
201: SARGGEIAGL EPMNFITFAT PHLGSRGHRQ FPILCGLPFL ERTASQTAHL AAGRTGKHLF LVDNDDGNAP LLIRMATDSD DLKFISALNA FKRRVAYANV
301: NFDSMVGWRT SSIRRPNELP KPNLLATDPN YPHIVYVERG NVDNGSCQST STVVTEQDTD LEEEMIHGLS QLSWERVDVS FHNSKQRYVA HSTIQVKTYW
401: LHSDGKDVVF HMMDHFGL

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT4G25770]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.