Factsheet for Os08t0143700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0641400-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	Os04t0641400-02	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G306200.1	Wheat	cytosol	84.0	83.29
TraesCS7B01G206400.1	Wheat	cytosol	83.71	83.0
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	83.43	82.95
OQU79861	Sorghum	cytosol	81.43	80.51
Zm00001d024645_P001	Maize	cytosol	78.86	71.69
HORVU7Hr1G072940.6	Barley	plastid	76.29	66.92
KRG90131	Soybean	cytosol	63.43	62.36
CDY05841	Canola	cytosol	59.43	61.36
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	62.57	61.34
Bra035731.1-P	Field mustard	cytosol	59.43	60.82
KRH33381	Soybean	cytosol	61.71	60.5
CDX71694	Canola	cytosol	60.29	59.77
VIT_16s0013g01410.t01	Wine grape	cytosol	58.29	58.62
Solyc03g093510.2.1	Tomato	nucleus	60.0	58.17
PGSC0003DMT400027928	Potato	nucleus	59.71	58.06
PGSC0003DMT400069125	Potato	cytosol	59.71	57.42
Solyc05g052020.2.1	Tomato	cytosol	59.14	56.87
Os03t0726800-01	Rice	cytosol	49.14	44.68
Os08t0447300-00	Rice	plasma membrane	50.0	41.57
Os02t0655600-01	Rice	cytosol	16.29	41.3
Os06t0154400-01	Rice	cytosol, nucleus, plastid	21.71	39.38
Os02t0787100-01	Rice	plastid	50.86	38.44

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	EntrezGene:4344647	InterPro:AB_hydrolase	ProteinID:BAD17029.1	ProteinID:BAF22893.1
ProteinID:BAT03805.1	InterPro:DUF676_lipase-like	ProteinID:EEE68029.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0044255	GO:GO:0052689
InterPro:IPR029058	EnsemblPlantsGene:Os08g0143700	EnsemblPlants:Os08t0143700-01	PFAM:PF05057	PANTHER:PTHR12482	PANTHER:PTHR12482:SF14
UniProt:Q6ZDM1	SUPFAM:SSF53474	UniParc:UPI000035ADA1	RefSeq:XP_015648448.1	:	:

Description

Protein of unknown function DUF676, hydrolase-like domain containing protein. (Os08t0143700-01)

Coordinates

chr8:-:2412327..2418672

Molecular Weight (calculated)

39154.2 Da

IEP (calculated)

5.142

GRAVY (calculated)

-0.249

Length

350 amino acids

Sequence
(BLAST)

001: MGSIGGDEAA VLRAEESASG GVDVWSDAVS SHDPDHLLVM VHGILGSNAD WQYAANEFVK QLPDDVIVHC SEKNINTLTL EGVDVMGERL ADEVIDVIIR
101: KPELTKISFL AHSVGGLAAR YAIAKLYRHP SDTSKSETKG TIGGLEAMNF ITVATPHLGS RGNNQVPLLF GSIAMENFAS RVVHWIFRRT GKHLFLTDDD
201: EGEPPLLQRM AEDYGDLYFI SALHAFRRRV AYANADCDHI VGWRTSSIRR KTELPKWEES ISEKYPHIVH EEYSEELGDE TCQNSATVCD SDILEEKMVT
301: GLRRVSWEKV DVSFHTSMQR FAAHSIIQVK YQFMNEGADV IQHIIDHFQV

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.