Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G379700.1 | Wheat | plastid | 96.71 | 96.71 |
| TraesCS6A01G346200.1 | Wheat | plastid | 95.61 | 95.61 |
| Os02t0787100-01 | Rice | plastid | 73.9 | 72.79 |
| KXG31240 | Sorghum | plastid | 71.27 | 71.74 |
| Zm00001d018325_P001 | Maize | plastid | 69.08 | 69.38 |
| TraesCS7D01G281400.3 | Wheat | plastid | 49.12 | 51.85 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 38.6 | 50.0 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 37.94 | 49.15 |
| TraesCS4D01G057800.2 | Wheat | mitochondrion | 37.94 | 44.36 |
| TraesCS5D01G148300.1 | Wheat | mitochondrion | 12.94 | 37.11 |
| TraesCS7D01G105700.1 | Wheat | plastid | 32.89 | 34.8 |
| CDX81158 | Canola | cytosol | 13.82 | 33.51 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G329100.1 | EnsemblPlantsGene:TraesCS6D01G329100 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like | InterPro:IPR029058 |
| PANTHER:PTHR12482 | PANTHER:PTHR12482:SF15 | PFAM:PF05057 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 |
Description
No Description!
Coordinates
chr6D:-:433480084..433483871
Molecular Weight (calculated)
50840.3 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.523
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MPASSRLCAY ATCSLAASPV PTPPSPPLRC RLRRRHRRLA SSMGQSTSSP AGGGRSRGDS RWPALRLDLG LPPGRKQRPA GERLDLGSRL RRALSRPSPQ
101: STEVEIEAEE EGRDAGNRVE VEAGGADADH LVVMVNGLYG SSADWKFAAE QFVKRLPGKV YVHRSECNHS KLTYDGVDIM GERLAEEVHQ VVQRKGNLRK
201: ISIVAHSLGG LISRYAIGRL YEESTSEEPC LNMEKHSDEE NISGGGKIAG LEPMNFIASA TPHLGSRWNK QLPFLFGVPL LEQTAAETAH LIVGRTGKHL
301: FLSDRDDGKP PLLVRMVEDC DDGKFMSALR SFKRRVAYAN ITYDHIVGWS TSSIRRQHEL PKLELEANNE KYPHVIHVDT ANSEGSQQED SVDTSLTDSL
401: EEEMIRGLIQ VTWERVDVCF HESRLKYNAH YNIQVRTPMN LEGEDVIYHM IDNFLV
101: STEVEIEAEE EGRDAGNRVE VEAGGADADH LVVMVNGLYG SSADWKFAAE QFVKRLPGKV YVHRSECNHS KLTYDGVDIM GERLAEEVHQ VVQRKGNLRK
201: ISIVAHSLGG LISRYAIGRL YEESTSEEPC LNMEKHSDEE NISGGGKIAG LEPMNFIASA TPHLGSRWNK QLPFLFGVPL LEQTAAETAH LIVGRTGKHL
301: FLSDRDDGKP PLLVRMVEDC DDGKFMSALR SFKRRVAYAN ITYDHIVGWS TSSIRRQHEL PKLELEANNE KYPHVIHVDT ANSEGSQQED SVDTSLTDSL
401: EEEMIRGLIQ VTWERVDVCF HESRLKYNAH YNIQVRTPMN LEGEDVIYHM IDNFLV
001: MEEEDSVIPK NTEGDGRVGS DLEGIRKPKK MKKMRSRKSD DKETKKKKKK YWMGCLRAES DESGNVDLTV DFPGERTEPT HLVVMVNGLI GSAQNWRFAA
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
101: KQMLKKYPQD LLVHCSKRNH STQTFDGVDV MGERLAEEVR SVIKRHPSLQ KISFVGHSLG GLIARYAIGR LYEQESREEL PHNSDDIGDK CSIEEPKARI
201: AGLEPVYFIT SATPHLGSRG HKQVPLFSGS YTLERLATRM SGCLGKTGKH LFLADSDGGK PPLLLRMVKD SRDLKFISAL QCFKRRIAYA NTSFDHLVGW
301: STSSIRRHNE LPKLQRGPVN EKYPHIVNVE APDTASNYEE DHSRTKADRF KNLDMEEEMI RELTKLSWER VDVSFRGTLQ RFLAHNTIQV KTKMINSAGA
401: DVIQHMIDNF EP
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q08A69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.