Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36691 | Canola | plastid | 91.0 | 94.12 |
| Bra003923.1-P | Field mustard | plastid | 67.3 | 91.03 |
| AT1G71480.1 | Thale cress | plastid | 65.4 | 63.89 |
| CDX72810 | Canola | plastid | 65.88 | 58.16 |
| KXG40432 | Sorghum | peroxisome | 36.97 | 50.65 |
| Solyc11g042620.1.1 | Tomato | plastid | 49.29 | 45.81 |
| KRH77740 | Soybean | cytosol | 44.08 | 45.37 |
| TraesCSU01G023200.1 | Wheat | plastid | 43.13 | 44.17 |
| HORVU4Hr1G032500.2 | Barley | cytosol | 12.8 | 42.86 |
| KRH27793 | Soybean | plastid | 45.97 | 42.73 |
| TraesCS2A01G046200.1 | Wheat | mitochondrion | 40.28 | 42.71 |
| TraesCS2B01G058300.1 | Wheat | mitochondrion | 41.23 | 42.65 |
| GSMUA_Achr10P... | Banana | plastid | 43.6 | 40.35 |
| KXG32164 | Sorghum | plastid | 41.23 | 40.09 |
| VIT_18s0001g05960.t01 | Wine grape | plastid | 47.39 | 38.31 |
| Zm00001d040242_P001 | Maize | plastid | 40.76 | 38.22 |
| HORVU2Hr1G007080.13 | Barley | cytosol | 42.65 | 36.73 |
| Os09t0266000-02 | Rice | plastid | 37.91 | 24.17 |
| CDY35038 | Canola | plastid | 23.7 | 17.92 |
| CDX67496 | Canola | plastid | 23.7 | 17.92 |
Protein Annotations
| EnsemblPlants:CDX68309 | EnsemblPlantsGene:GSBRNA2T00099602001 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:SnoaL-like | PANTHER:PTHR33698 |
| PANTHER:PTHR33698:SF3 | PFAM:PF12680 | ProteinID:CDX68309 | ProteinID:CDX68309.1 | SEG:seg | SUPFAM:SSF54427 |
| UniParc:UPI0004EEF72F | MapMan:35.2 | : | : | : | : |
Description
BnaA07g23490D
Coordinates
chrLK031787:-:4960100..4961435
Molecular Weight (calculated)
23243.0 Da
IEP (calculated)
9.383
GRAVY (calculated)
0.088
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVTTSLISS LRSSSLLGTK VVTPRSVVLS RRLLSTSYVP ATKAALPSRA NNVVPKTPAY EIVSSFYTAI NSNDLSSARD LIAQDCVYED LIFSSPFVGR
101: TAILEFFGKF IDATSTDMQF VIDDISKEDS SAVGVSWHLG ELPKLTQWKG KNFPFSKSCS FYRLEVIDGK KQIVYVRDCV EPAIKPGESV IAAVKGVAWL
201: LRKFPQIADR F
101: TAILEFFGKF IDATSTDMQF VIDDISKEDS SAVGVSWHLG ELPKLTQWKG KNFPFSKSCS FYRLEVIDGK KQIVYVRDCV EPAIKPGESV IAAVKGVAWL
201: LRKFPQIADR F
001: MSFTASLVSY LTSPSLVSLN HLPPSFFLPT KLVKPTSLTH SQPPRLSASY GPAAKAATAN DVVPETAPTS ASEVVSSFYA AVNVHDLSSV TDLIAQDCVY
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
Arabidopsis Description
AT1G71480 protein [Source:UniProtKB/TrEMBL;Acc:Q9C9I5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.