Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G058300.1 | Wheat | mitochondrion | 95.48 | 93.14 |
| TraesCSU01G023200.1 | Wheat | plastid | 89.95 | 86.89 |
| HORVU4Hr1G032500.2 | Barley | cytosol | 22.61 | 71.43 |
| KXG40432 | Sorghum | peroxisome | 53.77 | 69.48 |
| HORVU2Hr1G007080.13 | Barley | cytosol | 75.88 | 61.63 |
| Zm00001d040242_P001 | Maize | plastid | 66.83 | 59.11 |
| KXG32164 | Sorghum | plastid | 64.32 | 58.99 |
| Solyc11g042620.1.1 | Tomato | plastid | 53.27 | 46.7 |
| KRH77740 | Soybean | cytosol | 46.23 | 44.88 |
| GSMUA_Achr10P... | Banana | plastid | 50.75 | 44.3 |
| AT1G71480.1 | Thale cress | plastid | 47.74 | 43.98 |
| KRH27793 | Soybean | plastid | 48.74 | 42.73 |
| CDY36691 | Canola | plastid | 43.72 | 42.65 |
| CDX68309 | Canola | plastid | 42.71 | 40.28 |
| CDX72810 | Canola | plastid | 45.73 | 38.08 |
| VIT_18s0001g05960.t01 | Wine grape | plastid | 48.74 | 37.16 |
| Os09t0266000-02 | Rice | plastid | 61.81 | 37.16 |
| Bra003923.1-P | Field mustard | plastid | 26.63 | 33.97 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G046200.1 | EnsemblPlantsGene:TraesCS2A01G046200 | Gene3D:3.10.450.50 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
| InterPro:NTF2-like_dom_sf | InterPro:SnoaL-like | PANTHER:PTHR33698 | PANTHER:PTHR33698:SF3 | PFAM:PF12680 | SEG:seg |
| SUPFAM:SSF54427 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:18058506..18059370
Molecular Weight (calculated)
21683.2 Da
IEP (calculated)
9.366
GRAVY (calculated)
-0.014
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGTQPLRL RVGVASAACR PPSPGIRARS GGRRRTRSVA VAAAAAVKGA AAAVVREFYE GVNRRDLAAV APLIAEGCVY EDLVFPRPMV GRDRVVGFFG
101: EFMGSVSPDL RFVIDDISGD DPSAVGVTWH LEWKGRPFPF SRGCSFYRCE PDPQRPQQIQ IVYGRDCVEP ATKPGELALV VIRGVTWILE RFPSLADRL
101: EFMGSVSPDL RFVIDDISGD DPSAVGVTWH LEWKGRPFPF SRGCSFYRCE PDPQRPQQIQ IVYGRDCVEP ATKPGELALV VIRGVTWILE RFPSLADRL
001: MSFTASLVSY LTSPSLVSLN HLPPSFFLPT KLVKPTSLTH SQPPRLSASY GPAAKAATAN DVVPETAPTS ASEVVSSFYA AVNVHDLSSV TDLIAQDCVY
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
Arabidopsis Description
AT1G71480 protein [Source:UniProtKB/TrEMBL;Acc:Q9C9I5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.