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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG40432 Sorghum peroxisome 32.33 69.48
TraesCS2A01G046200.1 Wheat mitochondrion 37.16 61.81
TraesCSU01G023200.1 Wheat plastid 37.46 60.19
TraesCS2B01G058300.1 Wheat mitochondrion 36.86 59.8
HORVU4Hr1G032500.2 Barley cytosol 10.88 57.14
KXG32164 Sorghum plastid 36.56 55.76
Zm00001d040242_P001 Maize plastid 37.76 55.56
HORVU2Hr1G007080.13 Barley cytosol 38.07 51.43
Solyc11g042620.1.1 Tomato plastid 33.53 48.9
KRH77740 Soybean cytosol 29.31 47.32
KRH27793 Soybean plastid 31.42 45.81
GSMUA_Achr10P... Banana plastid 31.12 45.18
AT1G71480.1 Thale cress plastid 29.0 44.44
VIT_18s0001g05960.t01 Wine grape plastid 31.42 39.85
CDX72810 Canola plastid 28.7 39.75
CDY36691 Canola plastid 24.47 39.71
CDX68309 Canola plastid 24.17 37.91
Bra003923.1-P Field mustard plastid 14.8 31.41
Protein Annotations
Gene3D:3.10.450.50MapMan:35.2EntrezGene:4346559EMBL:AK061549ProteinID:BAD38416.1ProteinID:BAF24630.1
ProteinID:BAT07133.1GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824
GO:GO:0003964GO:GO:0005215GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006139GO:GO:0006259GO:GO:0006278GO:GO:0006810
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009058GO:GO:0009987GO:GO:0015074
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0046983GO:GO:0055085InterPro:NTF2-like_dom_sfEnsemblPlantsGene:Os09g0266000EnsemblPlants:Os09t0266000-02PFAM:PF12680
PFAM:PF13966PANTHER:PTHR33698PANTHER:PTHR33698:SF3UniProt:Q67TV5InterPro:RVT-ZnfSUPFAM:SSF54427
InterPro:SnoaL-likeUniParc:UPI000042656ESEG:seg:::
Description
Similar to predicted protein. (Os09t0266000-01);RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein. (Os09t0266000-02);Similar to predicted protein. (Os09t0266000-03)
Coordinates
chr9:+:4988981..4991687
Molecular Weight (calculated)
36671.4 Da
IEP (calculated)
10.033
GRAVY (calculated)
-0.075
Length
331 amino acids
Sequence
(BLAST)
001: MALIHHHLAV PVAPAPPPRG LGPATAARRL TLHRRRRRSG AAAGRMTVTA SSMVEPASGE ETAARSAADV VRAFYDGVNR RDLAAVEPLI AEGCVYEDLV
101: FPNPFVGRAE ILGFFAGFMG SVSSDLRFVI DDISAGDDSR AVGVTWHLDW KGRPFPFSRG CSFYRLQLDE KQQQLQIVYG RDCVEPAVKP GESALLIIRA
201: VTWIFERFPR LANMLTKCVI GKIIWKSRAP ARCKFFMYTA MRGACLTADN LQRRGWHLAP VCHLCSQDRE TCAHIFLSCR YTQQVCATVR GRLGLSSTTP
301: SADLSSWWRS ARKSISKQDR KTFDAGVILV T
Best Arabidopsis Sequence Match ( AT1G71480.1 )
(BLAST)
001: MSFTASLVSY LTSPSLVSLN HLPPSFFLPT KLVKPTSLTH SQPPRLSASY GPAAKAATAN DVVPETAPTS ASEVVSSFYA AVNVHDLSSV TDLIAQDCVY
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
Arabidopsis Description
AT1G71480 protein [Source:UniProtKB/TrEMBL;Acc:Q9C9I5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.