Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36691 | Canola | plastid | 64.35 | 68.14 |
| CDX72810 | Canola | plastid | 74.54 | 67.36 |
| CDX68309 | Canola | plastid | 63.89 | 65.4 |
| KXG40432 | Sorghum | peroxisome | 40.74 | 57.14 |
| Bra003923.1-P | Field mustard | plastid | 40.74 | 56.41 |
| KRH77740 | Soybean | cytosol | 51.39 | 54.15 |
| Solyc11g042620.1.1 | Tomato | plastid | 54.63 | 51.98 |
| KRH27793 | Soybean | plastid | 52.78 | 50.22 |
| TraesCSU01G023200.1 | Wheat | plastid | 46.76 | 49.03 |
| TraesCS2B01G058300.1 | Wheat | mitochondrion | 45.37 | 48.04 |
| TraesCS2A01G046200.1 | Wheat | mitochondrion | 43.98 | 47.74 |
| KXG32164 | Sorghum | plastid | 46.3 | 46.08 |
| GSMUA_Achr10P... | Banana | plastid | 47.22 | 44.74 |
| HORVU4Hr1G032500.2 | Barley | cytosol | 12.96 | 44.44 |
| VIT_18s0001g05960.t01 | Wine grape | plastid | 53.24 | 44.06 |
| Zm00001d040242_P001 | Maize | plastid | 44.91 | 43.11 |
| HORVU2Hr1G007080.13 | Barley | cytosol | 47.22 | 41.63 |
| Os09t0266000-02 | Rice | plastid | 44.44 | 29.0 |
| AT5G41470.1 | Thale cress | plastid | 25.0 | 19.49 |
Protein Annotations
| Gene3D:3.10.450.50 | MapMan:35.2 | EntrezGene:843489 | ProteinID:AAG51815.1 | ProteinID:AEE35206.1 | EMBL:AK175810 |
| EMBL:AK175869 | EMBL:AK176645 | EMBL:AK176822 | EMBL:AK176871 | EMBL:AK316764 | ArrayExpress:AT1G71480 |
| EnsemblPlantsGene:AT1G71480 | RefSeq:AT1G71480 | TAIR:AT1G71480 | RefSeq:AT1G71480-TAIR-G | EnsemblPlants:AT1G71480.1 | TAIR:AT1G71480.1 |
| EMBL:BT010641 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 | RefSeq:NP_177304.1 | InterPro:NTF2 |
| InterPro:NTF2-like_dom_sf | PFAM:PF02136 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33698 | PANTHER:PTHR33698:SF3 | UniProt:Q9C9I5 | SUPFAM:SSF54427 |
| UniParc:UPI00000A09F9 | : | : | : | : | : |
Description
AT1G71480 protein [Source:UniProtKB/TrEMBL;Acc:Q9C9I5]
Coordinates
chr1:+:26931852..26933313
Molecular Weight (calculated)
23520.9 Da
IEP (calculated)
5.236
GRAVY (calculated)
0.097
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTASLVSY LTSPSLVSLN HLPPSFFLPT KLVKPTSLTH SQPPRLSASY GPAAKAATAN DVVPETAPTS ASEVVSSFYA AVNVHDLSSV TDLIAQDCVY
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
101: EDLVFSSPFV GRKAILDFFG KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY GRDCVEPAIK PGETVLAAIK
201: GVTWLLQKFP QLADQF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.