Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02487 | Canola | nucleus, plastid | 92.36 | 90.26 |
| CDY51405 | Canola | nucleus | 35.55 | 84.25 |
| CDY08216 | Canola | nucleus | 80.4 | 73.78 |
| CDY26148 | Canola | nucleus, plastid | 82.39 | 69.47 |
| AT1G54060.1 | Thale cress | nucleus | 78.74 | 61.88 |
| CDY33093 | Canola | cytosol, plastid | 82.39 | 56.75 |
| CDY33246 | Canola | nucleus | 42.19 | 41.5 |
| CDX75751 | Canola | nucleus | 50.83 | 41.13 |
| CDY39099 | Canola | nucleus | 42.19 | 40.06 |
| CDY39101 | Canola | nucleus, plastid | 39.2 | 38.69 |
| KRH06239 | Soybean | nucleus | 45.85 | 37.3 |
| KRH47662 | Soybean | nucleus, plastid | 45.51 | 37.23 |
| Solyc03g122030.1.1 | Tomato | nucleus | 44.85 | 37.19 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 44.19 | 36.54 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 44.85 | 36.19 |
| CDY36316 | Canola | nucleus | 29.9 | 35.71 |
| CDY00995 | Canola | nucleus | 28.9 | 33.98 |
| CDX70144 | Canola | cytosol | 27.57 | 33.2 |
| CDX71939 | Canola | nucleus, plastid | 29.9 | 29.9 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 33.55 | 29.62 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 35.55 | 29.56 |
| CDX98311 | Canola | nucleus | 29.24 | 28.21 |
| CDX67755 | Canola | nucleus | 29.57 | 28.16 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 33.55 | 27.3 |
| CDX98849 | Canola | cytosol | 27.57 | 27.04 |
| Zm00001d003549_P001 | Maize | nucleus | 33.22 | 25.97 |
| Zm00001d025514_P001 | Maize | nucleus | 33.55 | 25.77 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 34.55 | 25.74 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 33.89 | 25.37 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 35.22 | 25.36 |
| Os02t0565000-01 | Rice | nucleus | 35.22 | 25.3 |
| CDX93016 | Canola | nucleus | 16.61 | 25.25 |
| EES12241 | Sorghum | nucleus | 34.22 | 25.25 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 34.88 | 25.24 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 34.88 | 25.24 |
| Os04t0445600-00 | Rice | nucleus | 34.88 | 25.18 |
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 32.56 | 23.73 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 32.56 | 23.56 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 32.56 | 23.56 |
| Zm00001d010753_P001 | Maize | nucleus | 25.25 | 23.17 |
| KXG30464 | Sorghum | nucleus, plastid | 31.89 | 22.75 |
| CDX94808 | Canola | nucleus | 20.6 | 19.31 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 10.3 | 13.84 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 26.91 | 12.2 |
Protein Annotations
| EnsemblPlants:CDY61477 | EnsemblPlantsGene:GSBRNA2T00033886001 | Gene3D:1.10.10.60 | PANTHER:PTHR31307 | PFAM:PF13837 | ProteinID:CDY61477 |
| ProteinID:CDY61477.1 | SEG:seg | UniParc:UPI0004EE853D | UniProt:A0A078JAZ0 | MapMan:15.5.20 | : |
Description
BnaC03g78260DBnaC03g78260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAZ0]
Coordinates
chrLK034000:-:21887..23071
Molecular Weight (calculated)
33075.1 Da
IEP (calculated)
9.358
GRAVY (calculated)
-0.881
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEDETQPS PAPSSPPVLP TSNVTVASAT KPPPSPPSPS RNALALVVHT PSVTVNKNGR SGGGGGGGRD DCWSEEATRV LIDAWGERFA EPGKGTLKQQ
101: QWHEVAEVVN GSGQCKYTKT DVQCKNRIDT VKKKYKQEKA KIASGDGPSK WAFFKKLESL IGGGGKAQVV GARSSGPMRW HFRKRSASET ESESDPEHSA
201: ESLPPLQPLP KRLKMGESGV GEVAKAILGF TEAYEKAETG KIKLMLELEK ERMKFVKEME LQRMQFLRTQ MEITQKNQEE ERSKPRINDD RNVKNNGDVS
301: S
101: QWHEVAEVVN GSGQCKYTKT DVQCKNRIDT VKKKYKQEKA KIASGDGPSK WAFFKKLESL IGGGGKAQVV GARSSGPMRW HFRKRSASET ESESDPEHSA
201: ESLPPLQPLP KRLKMGESGV GEVAKAILGF TEAYEKAETG KIKLMLELEK ERMKFVKEME LQRMQFLRTQ MEITQKNQEE ERSKPRINDD RNVKNNGDVS
301: S
001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
Arabidopsis Description
ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.