Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039964.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDY31765 | Canola | plastid | 100.0 | 100.0 |
| CDY42763 | Canola | plastid | 99.1 | 99.1 |
| AT2G29125.1 | Thale cress | plastid | 91.89 | 88.7 |
| CDY09914 | Canola | plastid | 76.58 | 77.98 |
| CDY06263 | Canola | plastid | 73.87 | 77.36 |
| KRG98477 | Soybean | nucleus, plastid | 46.85 | 69.33 |
| KRH10233 | Soybean | nucleus, plastid | 56.76 | 64.29 |
| KRH23099 | Soybean | nucleus, plastid | 56.76 | 64.29 |
| KRH24763 | Soybean | plastid | 60.36 | 63.81 |
| KRH29766 | Soybean | plastid | 54.05 | 58.25 |
| CDX80260 | Canola | nucleus | 50.45 | 39.16 |
| CDY33045 | Canola | nucleus | 50.45 | 39.16 |
| CDY48681 | Canola | cytosol, plastid | 48.65 | 38.57 |
| Solyc06g076320.1.1 | Tomato | nucleus, plastid | 38.74 | 35.54 |
| CDX68390 | Canola | nucleus, plastid | 45.95 | 35.42 |
| CDY71167 | Canola | nucleus | 45.95 | 35.42 |
Protein Annotations
| EnsemblPlants:CDX99282 | EnsemblPlantsGene:GSBRNA2T00107553001 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | PFAM:PF08137 |
| ProteinID:CDX99282 | ProteinID:CDX99282.1 | ProteinID:CDY31765.1 | SEG:seg | UniParc:UPI000254422B | UniProt:A0A078GZ60 |
| MapMan:11.10.1.6.1 | : | : | : | : | : |
Description
BnaC05g33970DBnaA04g17010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ60]
Coordinates
chrLK031909:-:909114..909449
Molecular Weight (calculated)
12325.5 Da
IEP (calculated)
11.294
GRAVY (calculated)
-0.777
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKWKLSKK ETTTSSSSKS KFSRSFSTSA SSAKSPLFAR SSSTKCSVPL SSSSSSSISR SFSRKERKSS SSPSSSITRK YSSLAKEQKA RFYIMRRCVA
101: MLVCWHKHGD S
101: MLVCWHKHGD S
001: MEEKWKLSKK DTTASSSSSK SKFSRSFSTS ASSTKSPIFV RSSSTKCSVP SSSSSSSSSS SISRSFSRKE RRSSSSSSSS ITQKYSSLAK EQKARFYIMR
101: RCVAMLVCWH KHGDS
101: RCVAMLVCWH KHGDS
Arabidopsis Description
RTFL2RTFL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VPZ1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.