Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23099 | Soybean | nucleus, plastid | 38.84 | 47.96 |
| KRH10233 | Soybean | nucleus, plastid | 38.84 | 47.96 |
| KRG98477 | Soybean | nucleus, plastid | 28.93 | 46.67 |
| KRH24763 | Soybean | plastid | 38.02 | 43.81 |
| AT1G07490.1 | Thale cress | plastid | 38.02 | 42.99 |
| CDY42763 | Canola | plastid | 36.36 | 39.64 |
| Bra031578.1-P | Field mustard | plastid | 34.71 | 39.62 |
| CDY06263 | Canola | plastid | 34.71 | 39.62 |
| CDY09914 | Canola | plastid | 35.54 | 39.45 |
| AT2G29125.1 | Thale cress | plastid | 37.19 | 39.13 |
| Bra030686.1-P | Field mustard | plastid | 34.71 | 38.89 |
| CDX99282 | Canola | plastid | 35.54 | 38.74 |
| CDY31765 | Canola | plastid | 35.54 | 38.74 |
| Bra039964.1-P | Field mustard | plastid | 35.54 | 38.74 |
| KRH29766 | Soybean | plastid | 32.23 | 37.86 |
| AT5G59510.1 | Thale cress | nucleus | 38.02 | 31.94 |
| CDY48681 | Canola | cytosol, plastid | 35.54 | 30.71 |
| AT3G46613.1 | Thale cress | nucleus, plastid | 36.36 | 30.56 |
| CDX68390 | Canola | nucleus, plastid | 35.54 | 29.86 |
| CDX80260 | Canola | nucleus | 33.88 | 28.67 |
| CDY33045 | Canola | nucleus | 33.88 | 28.67 |
| CDY71167 | Canola | nucleus | 33.06 | 27.78 |
Protein Annotations
| EnsemblPlants:Solyc06g076320.1.1 | EnsemblPlantsGene:Solyc06g076320.1 | InterPro:DVL | PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | PFAM:PF08137 |
| SEG:seg | UniParc:UPI000276710F | UniProt:K4C9Z2 | MapMan:11.10.1.6.1 | : | : |
Description
No Description!
Coordinates
chr6:+:47417283..47417648
Molecular Weight (calculated)
13837.3 Da
IEP (calculated)
10.757
GRAVY (calculated)
-1.075
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYYMDERWK LSKDDPCCNS YSSSNNKSSS LFRSFSQKSP NSNISSLPRS LSQKNPHKSS LSRSSSQKSS TSKCRLTKSA SQRCANFRSK CSNLAKEQKS
101: KFYIVKRCIG MLVRWKKHGD S
101: KFYIVKRCIG MLVRWKKHGD S
001: MDDENLWKVV KKDSIFETTH FSSKPVFTRS FSTKTSSSSS KPVFTRSFST KPTSYSSSEP IFRRSFSAKP TSSKSPFLSR SGSTKCPVDT SSTSKCSISR
101: SLSQKGASVT RKCRNMAKEH KSRFYIMKRC VLMLVCWHKH ACDS
101: SLSQKGASVT RKCRNMAKEH KSRFYIMKRC VLMLVCWHKH ACDS
Arabidopsis Description
RTFL5At5g59510 [Source:UniProtKB/TrEMBL;Acc:Q8LE84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.