Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06263 | Canola | plastid | 100.0 | 100.0 |
| CDY09914 | Canola | plastid | 100.0 | 97.25 |
| AT1G07490.1 | Thale cress | plastid | 90.57 | 89.72 |
| Bra030686.1-P | Field mustard | plastid | 90.57 | 88.89 |
| Bra039964.1-P | Field mustard | plastid | 77.36 | 73.87 |
| KRG98477 | Soybean | nucleus, plastid | 43.4 | 61.33 |
| KRH24763 | Soybean | plastid | 56.6 | 57.14 |
| KRH10233 | Soybean | nucleus, plastid | 51.89 | 56.12 |
| KRH23099 | Soybean | nucleus, plastid | 51.89 | 56.12 |
| KRH29766 | Soybean | plastid | 50.0 | 51.46 |
| Solyc06g076320.1.1 | Tomato | nucleus, plastid | 39.62 | 34.71 |
Protein Annotations
Description
AT1G07490 (E=5e-013) RTFL3, DVL9 | RTFL3 (ROTUNDIFOLIA LIKE 3)
Coordinates
chrA09:+:35743151..35743471
Molecular Weight (calculated)
11568.6 Da
IEP (calculated)
10.791
GRAVY (calculated)
-0.749
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEKWKLSKK DASAASCSSS SSSKSKFSRS YSTSASSTKA PAFVRSSSTK CSVPSSISRS SSKKEKGSSS SSITQKYSSL AKEQKGRFYI MRRCVAMLVC
101: WHKHDS
101: WHKHDS
001: MDEKWRLSKK DALAASCSSS STSSKSKFSR SFSTSASSSK APAFVRSSST KCSVPSSSSS SISRSSSKKE KGSITQKYSS LAKEQKGRFY IMRRCVAMLV
101: CWHKHDS
101: CWHKHDS
Arabidopsis Description
RTFL3RTFL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1R5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.