Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G59510.1 | Thale cress | nucleus | 73.61 | 73.61 |
| CDX68390 | Canola | nucleus, plastid | 70.83 | 70.83 |
| CDY71167 | Canola | nucleus | 70.83 | 70.83 |
| AT1G07490.1 | Thale cress | plastid | 40.97 | 55.14 |
| KRG98477 | Soybean | nucleus, plastid | 27.08 | 52.0 |
| KRH10233 | Soybean | nucleus, plastid | 34.72 | 51.02 |
| KRH24763 | Soybean | plastid | 36.81 | 50.48 |
| AT2G29125.1 | Thale cress | plastid | 40.28 | 50.43 |
| KRH23099 | Soybean | nucleus, plastid | 33.33 | 48.98 |
| KRH29766 | Soybean | plastid | 31.94 | 44.66 |
| Solyc06g076320.1.1 | Tomato | nucleus, plastid | 30.56 | 36.36 |
Protein Annotations
| MapMan:11.10.1.6.1 | EntrezGene:5008070 | ProteinID:AEE78182.1 | ArrayExpress:AT3G46613 | EnsemblPlantsGene:AT3G46613 | RefSeq:AT3G46613 |
| TAIR:AT3G46613 | RefSeq:AT3G46613-TAIR-G | EnsemblPlants:AT3G46613.1 | TAIR:AT3G46613.1 | ProteinID:DAA02286.1 | InterPro:DVL |
| GO:GO:0003674 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0048367 | RefSeq:NP_001078252.1 | PFAM:PF08137 |
| PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | UniProt:Q6IM86 | Symbol:RTFL4 | UniParc:UPI00003B31CD | SEG:seg |
Description
RTFL4DVL15 [Source:UniProtKB/TrEMBL;Acc:Q6IM86]
Coordinates
chr3:+:17165791..17166399
Molecular Weight (calculated)
16107.2 Da
IEP (calculated)
11.342
GRAVY (calculated)
-0.547
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEKLWNHT KKDSIFQTTH FSSSSKPFFT RSFSTKTSSS PSSKSHFTRS FSTKPSSSSS SSDLIFRRSF SAKPKTSKSL LLSRSCSTKS SADLSSKSSS
101: LSRILSKKGA SVTGKCFKVA KEHKSRFYII KRCVLMLVCW HKHS
101: LSRILSKKGA SVTGKCFKVA KEHKSRFYII KRCVLMLVCW HKHS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.