Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80260 | Canola | nucleus | 81.94 | 82.52 |
| CDY33045 | Canola | nucleus | 81.94 | 82.52 |
| CDY48681 | Canola | cytosol, plastid | 79.86 | 82.14 |
| AT3G46613.1 | Thale cress | nucleus, plastid | 73.61 | 73.61 |
| AT1G07490.1 | Thale cress | plastid | 40.97 | 55.14 |
| KRH24763 | Soybean | plastid | 39.58 | 54.29 |
| AT2G29125.1 | Thale cress | plastid | 43.06 | 53.91 |
| KRH10233 | Soybean | nucleus, plastid | 36.11 | 53.06 |
| KRH23099 | Soybean | nucleus, plastid | 35.42 | 52.04 |
| KRG98477 | Soybean | nucleus, plastid | 27.08 | 52.0 |
| KRH29766 | Soybean | plastid | 35.42 | 49.51 |
| Solyc06g076320.1.1 | Tomato | nucleus, plastid | 31.94 | 38.02 |
Protein Annotations
| MapMan:11.10.1.6.1 | EntrezGene:836070 | ProteinID:AED97199.1 | ArrayExpress:AT5G59510 | EnsemblPlantsGene:AT5G59510 | RefSeq:AT5G59510 |
| TAIR:AT5G59510 | RefSeq:AT5G59510-TAIR-G | EnsemblPlants:AT5G59510.1 | TAIR:AT5G59510.1 | EMBL:AY085568 | EMBL:BK001761 |
| EMBL:BT024678 | InterPro:DVL | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0048367 | RefSeq:NP_200759.2 |
| PFAM:PF08137 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33102 | PANTHER:PTHR33102:SF3 | UniProt:Q8LE84 | Symbol:RTFL5 | UniParc:UPI00000AB321 | SEG:seg |
Description
RTFL5At5g59510 [Source:UniProtKB/TrEMBL;Acc:Q8LE84]
Coordinates
chr5:+:23989755..23990824
Molecular Weight (calculated)
16235.3 Da
IEP (calculated)
10.862
GRAVY (calculated)
-0.628
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDENLWKVV KKDSIFETTH FSSKPVFTRS FSTKTSSSSS KPVFTRSFST KPTSYSSSEP IFRRSFSAKP TSSKSPFLSR SGSTKCPVDT SSTSKCSISR
101: SLSQKGASVT RKCRNMAKEH KSRFYIMKRC VLMLVCWHKH ACDS
101: SLSQKGASVT RKCRNMAKEH KSRFYIMKRC VLMLVCWHKH ACDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.