Factsheet for AT2G29125.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42763	Canola	plastid	89.57	92.79
Bra039964.1-P	Field mustard	plastid	88.7	91.89
CDX99282	Canola	plastid	88.7	91.89
CDY31765	Canola	plastid	88.7	91.89
AT1G07490.1	Thale cress	plastid	75.65	81.31
KRG98477	Soybean	nucleus, plastid	43.48	66.67
KRH10233	Soybean	nucleus, plastid	54.78	64.29
KRH23099	Soybean	nucleus, plastid	54.78	64.29
KRH24763	Soybean	plastid	56.52	61.9
KRH29766	Soybean	plastid	50.43	56.31
AT5G59510.1	Thale cress	nucleus	53.91	43.06
AT3G46613.1	Thale cress	nucleus, plastid	50.43	40.28
Solyc06g076320.1.1	Tomato	nucleus, plastid	39.13	37.19

Protein Annotations

MapMan:11.10.1.6.1	EntrezGene:817461	UniProt:A0A178VPZ1	ProteinID:AEC08214.1	ArrayExpress:AT2G29125	EnsemblPlantsGene:AT2G29125
RefSeq:AT2G29125	TAIR:AT2G29125	RefSeq:AT2G29125-TAIR-G	EnsemblPlants:AT2G29125.1	TAIR:AT2G29125.1	EMBL:AY136336
EMBL:BK001756	EMBL:BT000101	InterPro:DVL	GO:GO:0003674	GO:GO:0007275	GO:GO:0008150
GO:GO:0048367	RefSeq:NP_850130.1	ProteinID:OAP08419.1	PFAM:PF08137	PO:PO:0000293	PANTHER:PTHR33102
PANTHER:PTHR33102:SF3	UniProt:Q8L7D0	Symbol:RTFL2	UniParc:UPI00000AC74C	SEG:seg	:

Description

RTFL2RTFL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VPZ1]

Coordinates

chr2:+:12523276..12524193

Molecular Weight (calculated)

12651.7 Da

IEP (calculated)

11.259

GRAVY (calculated)

-0.781

Length

115 amino acids

Sequence
(BLAST)

001: MEEKWKLSKK DTTASSSSSK SKFSRSFSTS ASSTKSPIFV RSSSTKCSVP SSSSSSSSSS SISRSFSRKE RRSSSSSSSS ITQKYSSLAK EQKARFYIMR
101: RCVAMLVCWH KHGDS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.