CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012670.1-P	Field mustard	cytosol	100.0	100.0
CDY09635	Canola	cytosol, mitochondrion	98.82	98.82
AT4G17270.1	Thale cress	mitochondrion	90.56	89.5
CDY28923	Canola	cytosol, mitochondrion	85.55	84.55
CDY40559	Canola	cytosol	85.55	84.55
CDX77775	Canola	cytosol, mitochondrion	82.6	82.35
CDY42976	Canola	cytosol	41.3	81.87
CDY17728	Canola	cytosol, mitochondrion	80.53	81.74
VIT_10s0405g00020.t01	Wine grape	cytosol	81.12	80.88
KRH11537	Soybean	cytosol	78.47	79.64
KRH36554	Soybean	cytosol	78.47	79.4
PGSC0003DMT400021798	Potato	cytosol	78.47	78.01
Solyc05g054130.2.1	Tomato	cytosol	78.17	77.71
PGSC0003DMT400034558	Potato	cytosol	76.4	76.18
Solyc11g012400.1.1	Tomato	cytosol	76.11	75.88
GSMUA_AchrUn_...	Banana	cytosol	38.94	75.86
KRH01988	Soybean	endoplasmic reticulum, extracellular	74.04	75.38
CDY42975	Canola	mitochondrion	38.94	74.16
GSMUA_Achr1P22810_001	Banana	cytosol	71.68	72.32
CDY25960	Canola	cytosol	78.47	71.51
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	33.63	70.37
Zm00001d021954_P003	Maize	plasma membrane	69.32	69.94
Os07t0585100-01	Rice	plasma membrane	68.73	69.35
TraesCS2D01G197000.1	Wheat	golgi	68.73	69.14
TraesCS2B01G216100.1	Wheat	cytosol	68.73	69.14
TraesCS2A01G191000.1	Wheat	cytosol	68.73	69.14
HORVU2Hr1G036030.1	Barley	cytosol	68.73	69.14
Zm00001d006710_P004	Maize	mitochondrion	68.44	69.05
CDY41055	Canola	mitochondrion	78.76	68.99
CDY37193	Canola	cytosol	9.73	67.35
KRH51169	Soybean	cytosol	15.63	67.09
CDY04151	Canola	cytosol	64.01	63.08
Os03t0172200-01	Rice	plasma membrane	57.23	54.19
Zm00001d027862_P002	Maize	plastid	56.34	51.76
TraesCS4A01G015400.2	Wheat	plastid	56.05	51.63
TraesCS4D01G287400.4	Wheat	plastid	54.87	50.54
TraesCS4B01G288500.2	Wheat	plastid	54.57	50.27
CDY45561	Canola	cytosol	64.01	45.78
CDX92571	Canola	cytosol	41.89	41.16
CDY13930	Canola	cytosol	41.89	41.16
OQU85418	Sorghum	cytosol	19.76	30.59

Protein Annotations

EnsemblPlants:CDX90480	EnsemblPlantsGene:GSBRNA2T00151096001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDX90480	ProteinID:CDX90480.1	SUPFAM:SSF48371	UniParc:UPI0002540995	MapMan:35.1	:

Description

BnaA03g43010D

Coordinates

chrLK031863:-:450446..453094

Molecular Weight (calculated)

39199.4 Da

IEP (calculated)

9.126

GRAVY (calculated)

-0.307

Length

339 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPPDIVRQTR DLLVYADRSV SIPDLRESKR QEKLSELSKN LRELKLILYG NSDAEPVAEA CAQLTQEFFK GDTLRRLITM LQYLNLEARK
101: DATQVVANLQ RQQVNSRLIA SDYLESNIDL MDFLVDGFEN TDMALHYGTM FRECIRHQIV AKYVLDSQHV KKFFYYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSVV MTKYVSSMDN LRILMNLLRE SSKTIQIDAF HVFKLFVANQ RKPSDIINIL
301: VANKNKLLRL LADVKPDKED ESFEADKAQV VREIVSLKP

Best Arabidopsis Sequence Match ( AT4G17270.1 )
(BLAST)

001: MRGLFKSKPR TPADIVRQTR DLLLYADRSN SFPDLRESKR EEKMVELSKS IRDLKLILYG NSEAEPVAEA CAQLTQEFFK ADTLRRLLTS LPNLNLEARK
101: DATQVVANLQ RQQVNSRLIA ADYLESNIDL MDFLVDGFEN TDMALHYGTM FRECIRHQIV AKYVLDSEHV KKFFYYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLIKN EDWFFADYNS KLLESTNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSMDN LRILMNLLRE SSKTIQIEAF HVFKLFVANQ NKPSDIANIL
301: VANRNKLLRL LADIKPDKED ERFDADKAQV VREIANLKLR ELA

Arabidopsis Description

Putative MO25-like protein At4g17270 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0M4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.