Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g012400.1.1 | Tomato | cytosol | 87.35 | 87.35 |
| PGSC0003DMT400034558 | Potato | cytosol | 87.35 | 87.35 |
| KRH11537 | Soybean | cytosol | 84.12 | 85.63 |
| Bra022139.1-P | Field mustard | cytosol | 86.18 | 85.42 |
| CDY28923 | Canola | cytosol, mitochondrion | 86.18 | 85.42 |
| AT5G47540.1 | Thale cress | cytosol | 85.88 | 85.13 |
| CDY40559 | Canola | cytosol | 85.88 | 85.13 |
| KRH36554 | Soybean | cytosol | 83.82 | 85.07 |
| PGSC0003DMT400021798 | Potato | cytosol | 84.71 | 84.46 |
| Solyc05g054130.2.1 | Tomato | cytosol | 84.41 | 84.16 |
| Bra024936.1-P | Field mustard | cytosol, mitochondrion | 81.47 | 82.93 |
| CDY17728 | Canola | cytosol, mitochondrion | 81.18 | 82.63 |
| CDX77775 | Canola | cytosol, mitochondrion | 82.35 | 82.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.06 | 82.18 |
| CDX90480 | Canola | cytosol | 80.88 | 81.12 |
| Bra012670.1-P | Field mustard | cytosol | 80.88 | 81.12 |
| CDY09635 | Canola | cytosol, mitochondrion | 80.29 | 80.53 |
| AT4G17270.1 | Thale cress | mitochondrion | 81.18 | 80.47 |
| KRH01988 | Soybean | endoplasmic reticulum, extracellular | 78.53 | 80.18 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 37.35 | 78.4 |
| GSMUA_Achr1P22810_001 | Banana | cytosol | 77.35 | 78.27 |
| Os07t0585100-01 | Rice | plasma membrane | 77.35 | 78.27 |
| HORVU2Hr1G036030.1 | Barley | cytosol | 76.76 | 77.45 |
| TraesCS2D01G197000.1 | Wheat | golgi | 76.76 | 77.45 |
| TraesCS2B01G216100.1 | Wheat | cytosol | 76.76 | 77.45 |
| Zm00001d021954_P003 | Maize | plasma membrane | 76.47 | 77.38 |
| KRH51169 | Soybean | cytosol | 17.94 | 77.22 |
| TraesCS2A01G191000.1 | Wheat | cytosol | 75.88 | 76.56 |
| Zm00001d006710_P004 | Maize | mitochondrion | 75.0 | 75.89 |
| VIT_19s0090g01550.t01 | Wine grape | mitochondrion | 73.53 | 74.4 |
| Bra014431.1-P | Field mustard | cytosol | 30.0 | 73.91 |
| CDY42976 | Canola | cytosol | 37.06 | 73.68 |
| CDY25960 | Canola | cytosol | 77.94 | 71.24 |
| Bra026241.1-P | Field mustard | mitochondrion | 57.94 | 70.86 |
| CDY41055 | Canola | mitochondrion | 77.35 | 67.96 |
| Bra017480.1-P | Field mustard | cytosol | 77.06 | 67.88 |
| VIT_12s0057g00410.t01 | Wine grape | cytosol | 69.71 | 67.33 |
| CDY42975 | Canola | mitochondrion | 33.24 | 63.48 |
| Os03t0172200-01 | Rice | plasma membrane | 66.18 | 62.85 |
| Zm00001d027862_P002 | Maize | plastid | 60.59 | 55.83 |
| TraesCS4A01G015400.2 | Wheat | plastid | 58.82 | 54.35 |
| TraesCS4D01G287400.4 | Wheat | plastid | 57.94 | 53.53 |
| TraesCS4B01G288500.2 | Wheat | plastid | 57.35 | 52.99 |
| VIT_05s0020g02410.t01 | Wine grape | cytosol | 43.82 | 43.19 |
| OQU85418 | Sorghum | cytosol | 20.88 | 32.42 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100252109 | wikigene:100252109 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ProteinID:CBI18773 | ProteinID:CBI18773.3 | UniProt:E0CNN9 | EMBL:FN595003 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:IPR011989 | EntrezGene:LOC100252109 | wikigene:LOC100252109 | InterPro:Mo25 | PFAM:PF08569 | PANTHER:PTHR10182 |
| PANTHER:PTHR10182:SF12 | SUPFAM:SSF48371 | TIGR:TC63442 | UniParc:UPI00015CE3B2 | ArrayExpress:VIT_10s0405g00020 | EnsemblPlantsGene:VIT_10s0405g00020 |
| EnsemblPlants:VIT_10s0405g00020.t01 | unigene:Vvi.12103 | RefSeq:XP_002267661 | RefSeq:XP_002267661.1 | : | : |
Description
No Description!
Coordinates
chr10:+:1228948..1235712
Molecular Weight (calculated)
39345.4 Da
IEP (calculated)
8.794
GRAVY (calculated)
-0.386
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLFKSKPR TPVEVVRQTR DLLIYANRSS DTRESKREEK MSELSKLIRE LKSILYGNSE AEPQAEACCQ LTQEFFKENT LRLLITCLPK LNLETRKDAT
101: QVVANLQRQQ VHSRLIASDY LEANIDLMDV LISGYDNTDM ALHYGAMLRE CIRHQTVARY VLESAHMKKF FDYIQLPNFD IAADAAATFK ELLTRHKSTV
201: AEFLSKNYDW FFAEYNSKLL ESTNYITRRQ AVKLLGDILL DRSNSVVMTR YVSSRDNLRI LMNLLRESSK SIQIEAFHVF KLFAANQNKP PDIVSILVAN
301: KSKLLRLFAD FKTEKEDEQF EADKAQVVRE IAALEPRDRP
101: QVVANLQRQQ VHSRLIASDY LEANIDLMDV LISGYDNTDM ALHYGAMLRE CIRHQTVARY VLESAHMKKF FDYIQLPNFD IAADAAATFK ELLTRHKSTV
201: AEFLSKNYDW FFAEYNSKLL ESTNYITRRQ AVKLLGDILL DRSNSVVMTR YVSSRDNLRI LMNLLRESSK SIQIEAFHVF KLFAANQNKP PDIVSILVAN
301: KSKLLRLFAD FKTEKEDEQF EADKAQVVRE IAALEPRDRP
001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA
Arabidopsis Description
At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.