CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017480.1-P	Field mustard	cytosol	96.38	96.63
CDY25960	Canola	cytosol	87.08	90.59
CDX77775	Canola	cytosol, mitochondrion	78.04	88.82
CDY17728	Canola	cytosol, mitochondrion	75.71	87.72
AT5G47540.1	Thale cress	cytosol	76.23	86.01
CDY40559	Canola	cytosol	75.19	84.84
CDY28923	Canola	cytosol, mitochondrion	74.94	84.55
CDX90480	Canola	cytosol	68.99	78.76
CDY09635	Canola	cytosol, mitochondrion	68.73	78.47
KRH11537	Soybean	cytosol	67.18	77.84
KRH36554	Soybean	cytosol	67.18	77.61
VIT_10s0405g00020.t01	Wine grape	cytosol	67.96	77.35
KRH01988	Soybean	endoplasmic reticulum, extracellular	64.6	75.08
Solyc05g054130.2.1	Tomato	cytosol	65.37	74.19
Solyc11g012400.1.1	Tomato	cytosol	64.86	73.82
PGSC0003DMT400034558	Potato	cytosol	64.86	73.82
PGSC0003DMT400021798	Potato	cytosol	64.86	73.61
Zm00001d021954_P003	Maize	plasma membrane	63.82	73.51
CDY42976	Canola	cytosol	32.3	73.1
GSMUA_AchrUn_...	Banana	cytosol	32.56	72.41
Zm00001d006710_P004	Maize	mitochondrion	62.79	72.32
Os07t0585100-01	Rice	plasma membrane	62.27	71.73
GSMUA_Achr1P22810_001	Banana	cytosol	62.27	71.73
TraesCS2B01G216100.1	Wheat	cytosol	62.27	71.51
TraesCS2D01G197000.1	Wheat	golgi	62.27	71.51
HORVU2Hr1G036030.1	Barley	cytosol	61.5	70.62
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	29.46	70.37
TraesCS2A01G191000.1	Wheat	cytosol	61.24	70.33
KRH51169	Soybean	cytosol	13.95	68.35
CDY37193	Canola	cytosol	8.53	67.35
CDY42975	Canola	mitochondrion	30.49	66.29
CDY04151	Canola	cytosol	53.49	60.17
Os03t0172200-01	Rice	plasma membrane	50.39	54.47
Zm00001d027862_P002	Maize	plastid	48.58	50.95
TraesCS4A01G015400.2	Wheat	plastid	47.29	49.73
TraesCS4B01G288500.2	Wheat	plastid	46.77	49.18
TraesCS4D01G287400.4	Wheat	plastid	46.77	49.18
CDY45561	Canola	cytosol	54.01	44.09
CDX92571	Canola	cytosol	37.21	41.74
CDY13930	Canola	cytosol	36.95	41.45
OQU85418	Sorghum	cytosol	18.35	32.42

Protein Annotations

EnsemblPlants:CDY41055	EnsemblPlantsGene:GSBRNA2T00072371001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDY41055	ProteinID:CDY41055.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0004EEE249	UniProt:A0A078HR68
MapMan:35.1	:	:	:	:	:

Description

BnaA09g18340DBnaA09g18340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR68]

Coordinates

chrLK032489:-:100351..105446

Molecular Weight (calculated)

43988.0 Da

IEP (calculated)

7.574

GRAVY (calculated)

-0.153

Length

387 amino acids

Sequence
(BLAST)

001: MSVLCVVRVR IGSCVSTRGG AGRDASSAAR RLPSQHLTSS SYAGDPPGLF KSKPRTPVDL VRQTRDLLLY ADRSNSSSLP DSKRHEKMAE LSRNIRDIKF
101: ILYGNSEAEP VAEACAQLTQ EFFRQDTLRL FITSLPILNL ETRKDATQVV ANLQRQQVNY KLIASDYLEA NLDLMDVLIL GFENLDMALH YGAMFRECIR
201: HQIVAKYVLE SEHVKKFFDY IQLANFDIAA DAAATFKELL TRHKSTVADF LTNNEEWFFA DYNSKLLESV NYVTRRQAIK LLGDILLDRS NSAVMTKYVS
301: SMDYLMILMN LLIESSKSIQ IEAFHVFKLF VANQNKPAEI VNIMVTNRSK LLRLLADLRP DKEDERFEAD KSQVLREISS LEPLVLA

Best Arabidopsis Sequence Match ( AT2G03410.1 )
(BLAST)

001: MKGLFKNKSR LPGEIVRQTR DLIALAESEE EETDARNSKR LGICAELCRN IRDLKSILYG NGEAEPVPEA CLLLTQEFFR ADTLRPLIKS IPKLDLEARK
101: DATQIVANLQ KQQVEFRLVA SEYLESNLDV IDSLVEGIDH DHELALHYTG MLKECVRHQV VAKYILESKN LEKFFDYVQL PYFDVATDAS KIFRELLTRH
201: KSTVAEYLAK NYEWFFAEYN TKLLEKGSYF TKRQASKLLG DVLMDRSNSG VMVKYVSSLD NLRIMMNLLR EPTKNIQLEA FHIFKLFVAN ENKPEDIVAI
301: LVANRTKILR LFADLKPEKE DVGFETDKAL VMNEIATLSL LDIKTADR

Arabidopsis Description

MO25-like protein At2g03410 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.