Factsheet for Solyc05g054130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021798	Potato	cytosol	97.07	97.07
Solyc11g012400.1.1	Tomato	cytosol	86.8	87.06
VIT_10s0405g00020.t01	Wine grape	cytosol	84.16	84.41
Bra022139.1-P	Field mustard	cytosol	82.11	81.63
CDY28923	Canola	cytosol, mitochondrion	82.11	81.63
CDY40559	Canola	cytosol	81.82	81.34
KRH11537	Soybean	cytosol	79.47	81.14
AT5G47540.1	Thale cress	cytosol	81.23	80.76
KRH36554	Soybean	cytosol	79.18	80.6
Bra024936.1-P	Field mustard	cytosol, mitochondrion	78.59	80.24
CDY17728	Canola	cytosol, mitochondrion	78.3	79.94
GSMUA_AchrUn_...	Banana	cytosol	40.76	79.89
CDX77775	Canola	cytosol, mitochondrion	79.18	79.41
AT4G17270.1	Thale cress	mitochondrion	79.77	79.3
CDX90480	Canola	cytosol	77.71	78.17
Bra012670.1-P	Field mustard	cytosol	77.71	78.17
CDY09635	Canola	cytosol, mitochondrion	77.42	77.88
KRH01988	Soybean	endoplasmic reticulum, extracellular	75.95	77.78
Zm00001d021954_P003	Maize	plasma membrane	76.25	77.38
TraesCS2B01G216100.1	Wheat	cytosol	75.66	76.56
TraesCS2D01G197000.1	Wheat	golgi	75.66	76.56
TraesCS2A01G191000.1	Wheat	cytosol	75.37	76.26
KRH51169	Soybean	cytosol	17.6	75.95
HORVU2Hr1G036030.1	Barley	cytosol	74.78	75.67
Zm00001d006710_P004	Maize	mitochondrion	74.49	75.6
Os07t0585100-01	Rice	plasma membrane	74.49	75.6
GSMUA_Achr1P22810_001	Banana	cytosol	72.43	73.51
CDY42976	Canola	cytosol	36.36	72.51
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.02	71.6
Bra026241.1-P	Field mustard	mitochondrion	56.01	68.7
CDY25960	Canola	cytosol	74.49	68.28
Bra014431.1-P	Field mustard	cytosol	27.27	67.39
CDY41055	Canola	mitochondrion	74.19	65.37
Bra017480.1-P	Field mustard	cytosol	73.9	65.28
Solyc07g065130.2.1	Tomato	plastid	71.55	59.37
CDY42975	Canola	mitochondrion	30.21	57.87
Os03t0172200-01	Rice	plasma membrane	60.12	57.26
Zm00001d027862_P002	Maize	plastid	59.24	54.74
TraesCS4A01G015400.2	Wheat	plastid	56.6	52.45
TraesCS4D01G287400.4	Wheat	plastid	55.72	51.63
TraesCS4B01G288500.2	Wheat	plastid	55.13	51.09
Solyc01g080350.2.1	Tomato	plastid	42.52	42.65
OQU85418	Sorghum	cytosol	19.06	29.68

Protein Annotations

EnsemblPlants:Solyc05g054130.2.1	EnsemblPlantsGene:Solyc05g054130.2	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
SUPFAM:SSF48371	UniParc:UPI00027668F8	UniProt:K4C292	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5:+:64089024..64095958

Molecular Weight (calculated)

39503.8 Da

IEP (calculated)

8.551

GRAVY (calculated)

-0.335

Length

341 amino acids

Sequence
(BLAST)

001: MKGLLFKSKP KTPVELVRQT RDLLMYTQRN SDIRESKREE KMMELSKTMR DLKCVLYGNG QSEPVSDACS QLTQEFFRED TLRLLINMLP KLNLEARKDA
101: TQVVANLQRQ QVQSRLIACD YLEANIDLMD ILVAGYENIE LALHYGTMLR ECIRHQSVAR YVLESEHVKK FFDYIQLPNF DIAADAAATF KELLTRHKST
201: VAEFLSKNYD WFFAEYNSKL LESSNYITRR QAIKLLGDIL LDRSNAAVMT RYVSSRDNLR ILMNLLRESS KSIQIEAFHV FKLFAANKNK PSDIVSILIA
301: NRSKLLRLFA DFKTDKEDEQ FEADKAQVVK EIAALETKEL S

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.