CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022139.1-P	Field mustard	cytosol	99.71	99.71
CDY40559	Canola	cytosol	99.13	99.13
AT5G47540.1	Thale cress	cytosol	94.75	94.75
CDY17728	Canola	cytosol, mitochondrion	90.09	92.52
CDX77775	Canola	cytosol, mitochondrion	91.25	92.06
VIT_10s0405g00020.t01	Wine grape	cytosol	85.42	86.18
CDX90480	Canola	cytosol	84.55	85.55
CDY09635	Canola	cytosol, mitochondrion	83.97	84.96
KRH11537	Soybean	cytosol	81.34	83.53
KRH36554	Soybean	cytosol	81.34	83.28
Solyc05g054130.2.1	Tomato	cytosol	81.63	82.11
PGSC0003DMT400021798	Potato	cytosol	81.34	81.82
PGSC0003DMT400034558	Potato	cytosol	80.76	81.47
Solyc11g012400.1.1	Tomato	cytosol	80.17	80.88
KRH01988	Soybean	endoplasmic reticulum, extracellular	78.43	80.78
KRH51169	Soybean	cytosol	18.37	79.75
CDY25960	Canola	cytosol	84.84	78.23
GSMUA_AchrUn_...	Banana	cytosol	39.65	78.16
CDY42976	Canola	cytosol	38.48	77.19
TraesCS2D01G197000.1	Wheat	golgi	74.93	76.26
TraesCS2B01G216100.1	Wheat	cytosol	74.93	76.26
Zm00001d021954_P003	Maize	plasma membrane	74.64	76.19
TraesCS2A01G191000.1	Wheat	cytosol	74.64	75.96
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	35.86	75.93
GSMUA_Achr1P22810_001	Banana	cytosol	74.34	75.89
HORVU2Hr1G036030.1	Barley	cytosol	74.34	75.67
Os07t0585100-01	Rice	plasma membrane	73.76	75.3
CDY41055	Canola	mitochondrion	84.55	74.94
Zm00001d006710_P004	Maize	mitochondrion	73.18	74.7
CDY37193	Canola	cytosol	9.62	67.35
CDY42975	Canola	mitochondrion	34.4	66.29
CDY04151	Canola	cytosol	65.01	64.83
Os03t0172200-01	Rice	plasma membrane	60.35	57.82
TraesCS4A01G015400.2	Wheat	plastid	58.02	54.08
Zm00001d027862_P002	Maize	plastid	58.02	53.93
TraesCS4D01G287400.4	Wheat	plastid	57.14	53.26
TraesCS4B01G288500.2	Wheat	plastid	56.56	52.72
CDY45561	Canola	cytosol	64.72	46.84
CDX92571	Canola	cytosol	41.4	41.16
CDY13930	Canola	cytosol	41.11	40.87
OQU85418	Sorghum	cytosol	20.12	31.51

Protein Annotations

EnsemblPlants:CDY28923	EnsemblPlantsGene:GSBRNA2T00041622001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12	PFAM:PF08569
ProteinID:CDY28923	ProteinID:CDY28923.1	SUPFAM:SSF48371	UniParc:UPI0004EDD03F	UniProt:A0A078GWB8	MapMan:35.1

Description

BnaA02g25530DBnaA02g25530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWB8]

Coordinates

chrLK032228:+:95872..98394

Molecular Weight (calculated)

39638.8 Da

IEP (calculated)

7.550

GRAVY (calculated)

-0.352

Length

343 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPADIVRQTR DLLLYADRSK SLPDLRESKR EEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFR EDTLRLLITC LPKLNLETRK
101: DATQLVANLQ RQQVNSRLIA SDYLEANLDL MDVLMEGFEN TDLALHYGAM FRECIRHQIV ARYVLESEHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLIKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTRYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIINIL
301: VANKSKLLRL LADLKPDKED ERFEADKTQV LREIAALEPR DLA

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.