Factsheet for GSMUA_AchrUn_randomP08020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014431.1-P	Field mustard	cytosol	60.49	71.01
CDY42975	Canola	mitochondrion	59.26	53.93
GSMUA_Achr1P22810_001	Banana	cytosol	86.42	41.67
Os07t0585100-01	Rice	plasma membrane	83.95	40.48
Zm00001d021954_P003	Maize	plasma membrane	80.25	38.69
TraesCS2A01G191000.1	Wheat	cytosol	80.25	38.58
OQU90170	Sorghum	cytosol	79.63	38.39
TraesCS2D01G197000.1	Wheat	golgi	79.63	38.28
TraesCS2B01G216100.1	Wheat	cytosol	79.63	38.28
HORVU2Hr1G036030.1	Barley	cytosol	79.63	38.28
Zm00001d006710_P004	Maize	mitochondrion	78.4	37.8
KRH11537	Soybean	cytosol	77.78	37.72
KRH36554	Soybean	cytosol	77.78	37.61
VIT_10s0405g00020.t01	Wine grape	cytosol	78.4	37.35
VIT_19s0090g01550.t01	Wine grape	mitochondrion	74.69	36.01
Bra022139.1-P	Field mustard	cytosol	75.93	35.86
CDY28923	Canola	cytosol, mitochondrion	75.93	35.86
CDY40559	Canola	cytosol	75.93	35.86
CDX77775	Canola	cytosol, mitochondrion	74.07	35.29
PGSC0003DMT400034558	Potato	cytosol	74.07	35.29
AT5G47540.1	Thale cress	cytosol	74.69	35.28
Bra026241.1-P	Field mustard	mitochondrion	59.88	34.89
Bra024936.1-P	Field mustard	cytosol, mitochondrion	71.6	34.73
Solyc11g012400.1.1	Tomato	cytosol	72.84	34.71
CDY17728	Canola	cytosol, mitochondrion	70.99	34.43
Solyc05g054130.2.1	Tomato	cytosol	71.6	34.02
PGSC0003DMT400021798	Potato	cytosol	71.6	34.02
CDX90480	Canola	cytosol	70.37	33.63
Bra012670.1-P	Field mustard	cytosol	70.37	33.63
CDY09635	Canola	cytosol, mitochondrion	69.75	33.33
KRH01988	Soybean	endoplasmic reticulum, extracellular	67.9	33.03
AT4G17270.1	Thale cress	mitochondrion	69.75	32.94
CDY25960	Canola	cytosol	71.6	31.18
Bra017480.1-P	Field mustard	cytosol	70.37	29.53
CDY41055	Canola	mitochondrion	70.37	29.46
VIT_12s0057g00410.t01	Wine grape	cytosol	60.49	27.84
Os03t0172200-01	Rice	plasma membrane	59.88	27.09
KRH74028	Soybean	cytosol	58.64	26.91
KRH14096	Soybean	cytosol	57.41	26.35
OQU85419	Sorghum	cytosol	59.26	26.16
Zm00001d027862_P002	Maize	plastid	58.64	25.75
PGSC0003DMT400057131	Potato	plastid	62.96	24.82
Solyc07g065130.2.1	Tomato	plastid	61.11	24.09
TraesCS4A01G015400.2	Wheat	plastid	54.32	23.91
TraesCS4D01G287400.4	Wheat	plastid	54.32	23.91
TraesCS4B01G288500.2	Wheat	plastid	53.7	23.64
KXG40077	Sorghum	plastid	59.88	22.2
GSMUA_Achr11P...	Banana	cytosol	31.48	15.5
GSMUA_Achr5P27410_001	Banana	cytosol	25.31	14.14
CDY42976	Canola	cytosol	3.09	2.92
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
KRH51169	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP08020_001	EnsemblPlants:GSMUA_AchrUn_randomT08020_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG08020_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12
PFAM:PF08569	SUPFAM:SSF48371	UniParc:UPI00029517D0	UniProt:M0U7B3	MapMan:35.1	:

Description

Putative MO25-like protein At5g47540 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08020_001]

Coordinates

chrchrUn_random:+:33967182..33971350

Molecular Weight (calculated)

18735.8 Da

IEP (calculated)

7.875

GRAVY (calculated)

-0.327

Length

162 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPAEIVRHTR ELLIYVDLNS NSRDTKREEK MAELCKNIRE LKSILYGNSD SEPVAEACAQ LTQEFFRENT LRLLIVCLPK LNLEARKDAT
101: QVVANLQRQQ VHSRLIASDY LEANKDLLDL LISGYEDMDI ALHYGAMLRE CIRHQCIARY LI

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.