Factsheet for Bra024936.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17728	Canola	cytosol, mitochondrion	99.7	99.7
Bra014431.1-P	Field mustard	cytosol	39.22	94.93
AT5G47540.1	Thale cress	cytosol	94.01	91.55
Bra022139.1-P	Field mustard	cytosol	93.11	90.67
VIT_10s0405g00020.t01	Wine grape	cytosol	82.93	81.47
Bra012670.1-P	Field mustard	cytosol	82.04	80.83
KRH11537	Soybean	cytosol	80.54	80.54
KRH01988	Soybean	endoplasmic reticulum, extracellular	80.24	80.48
KRH36554	Soybean	cytosol	80.54	80.3
Solyc05g054130.2.1	Tomato	cytosol	80.24	78.59
PGSC0003DMT400034558	Potato	cytosol	79.64	78.24
Solyc11g012400.1.1	Tomato	cytosol	79.34	77.94
PGSC0003DMT400021798	Potato	cytosol	79.34	77.71
KRH51169	Soybean	cytosol	18.26	77.22
Bra017480.1-P	Field mustard	cytosol	88.02	76.17
GSMUA_AchrUn_...	Banana	cytosol	39.52	75.86
Zm00001d021954_P003	Maize	plasma membrane	75.45	75.0
TraesCS2D01G197000.1	Wheat	golgi	74.85	74.18
TraesCS2B01G216100.1	Wheat	cytosol	74.85	74.18
Zm00001d006710_P004	Maize	mitochondrion	74.25	73.81
Os07t0585100-01	Rice	plasma membrane	74.25	73.81
GSMUA_Achr1P22810_001	Banana	cytosol	74.25	73.81
HORVU2Hr1G036030.1	Barley	cytosol	74.25	73.59
TraesCS2A01G191000.1	Wheat	cytosol	73.95	73.29
Bra026241.1-P	Field mustard	mitochondrion	60.18	72.3
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.73	71.6
Bra017387.1-P	Field mustard	cytosol	65.57	63.66
Os03t0172200-01	Rice	plasma membrane	59.88	55.87
Zm00001d027862_P002	Maize	plastid	58.38	52.85
TraesCS4A01G015400.2	Wheat	plastid	57.19	51.9
TraesCS4D01G287400.4	Wheat	plastid	56.59	51.36
TraesCS4B01G288500.2	Wheat	plastid	55.99	50.82
Bra002195.1-P	Field mustard	cytosol	42.52	41.16
OQU85418	Sorghum	cytosol	20.36	31.05

Protein Annotations

EnsemblPlants:Bra024936.1	EnsemblPlants:Bra024936.1-P	EnsemblPlantsGene:Bra024936	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	PANTHER:PTHR10182	PANTHER:PTHR10182:SF12
PFAM:PF08569	SUPFAM:SSF48371	UniParc:UPI000253FA89	UniProt:M4E830	MapMan:35.1	:

Description

AT5G47540 (E=1e-174) | binding

Coordinates

chrA06:+:24305270..24307094

Molecular Weight (calculated)

38359.2 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.237

Length

334 amino acids

Sequence
(BLAST)

001: MKGLFKSKPR TPSDLVRQTR DLFLYISLPD SKVVMAELSR NIRDMKSILY GNSEAEPVAE ACAQLTQEFF REDTLRLLIT CLPKLNLETR KDATQVVANL
101: QRQQVNSKLI ASDYLEANLD LMDVLIEGFE NTDLALHYGA MFRECIRHQI VAKYVLESEH VKKFFDYIQL PNFDIAADAA ATFKELLTRH KSTVAEFLTN
201: NEDWFFADYN SKLLESSNYI TRRQAIKLLG DILLDRSNSA VMTKYVSSRD NLRILMNLLR ESSKSIQIEA FHVFKLFVAN QNKPADIVNI LVANRSKLLR
301: LLADLKPDKE DERFEADKSQ VLREIAALEP QDLA

Best Arabidopsis Sequence Match ( AT5G47540.1 )
(BLAST)

001: MKGLFKSKPR TPADLVRQTR DLLLFSDRST SLPDLRDSKR DEKMAELSRN IRDMKSILYG NSEAEPVAEA CAQLTQEFFK EDTLRLLITC LPKLNLETRK
101: DATQVVANLQ RQQVNSRLIA SDYLEANIDL MDVLIEGFEN TDMALHYGAM FRECIRHQIV AKYVLESDHV KKFFDYIQLP NFDIAADAAA TFKELLTRHK
201: STVAEFLTKN EDWFFADYNS KLLESSNYIT RRQAIKLLGD ILLDRSNSAV MTKYVSSRDN LRILMNLLRE SSKSIQIEAF HVFKLFAANQ NKPADIVNIL
301: VANRSKLLRL LADLKPDKED ERFEADKSQV LREIAALEPR DLA

Arabidopsis Description

At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.