Factsheet for Bra002195.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92571	Canola	cytosol	100.0	100.0
AT5G18940.1	Thale cress	cytosol	95.07	95.07
KRH20946	Soybean	cytosol	77.68	79.06
VIT_05s0020g02410.t01	Wine grape	cytosol	77.1	77.1
Solyc01g080350.2.1	Tomato	plastid	73.04	74.12
PGSC0003DMT400033238	Potato	cytosol	73.04	73.47
GSMUA_Achr11P...	Banana	cytosol	63.19	66.26
GSMUA_Achr5P27410_001	Banana	cytosol	55.07	65.52
Os07t0647100-01	Rice	mitochondrion	62.9	64.39
TraesCS2B01G163800.1	Wheat	mitochondrion	62.61	64.29
TraesCS2D01G142500.1	Wheat	mitochondrion	62.32	63.99
TraesCS2A01G139800.1	Wheat	mitochondrion	62.32	63.99
EER97658	Sorghum	mitochondrion	62.03	63.69
HORVU2Hr1G024780.11	Barley	cytosol	57.39	63.46
Os03t0359700-01	Rice	plasma membrane	60.87	62.5
TraesCS3B01G378800.1	Wheat	cytosol	57.1	61.76
EER92235	Sorghum	mitochondrion	59.42	61.75
TraesCS3D01G340700.1	Wheat	cytosol	56.52	61.13
TraesCS3A01G347100.1	Wheat	cytosol	55.36	59.87
Zm00001d007058_P002	Maize	mitochondrion	60.0	54.76
KRH08140	Soybean	plastid	14.49	52.08
HORVU3Hr1G088310.1	Barley	cytosol	56.81	50.26
KRH11335	Soybean	extracellular	13.33	49.46
Zm00001d029234_P016	Maize	mitochondrion	48.99	47.47
Bra024936.1-P	Field mustard	cytosol, mitochondrion	41.16	42.52
Bra012670.1-P	Field mustard	cytosol	41.16	41.89
Bra022139.1-P	Field mustard	cytosol	41.16	41.4
Bra026241.1-P	Field mustard	mitochondrion	31.88	39.57
Bra017387.1-P	Field mustard	cytosol	37.97	38.08
Bra017480.1-P	Field mustard	cytosol	42.03	37.56
Bra014431.1-P	Field mustard	cytosol	12.46	31.16

Protein Annotations

EnsemblPlants:Bra002195.1	EnsemblPlants:Bra002195.1-P	EnsemblPlantsGene:Bra002195	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Mo25	ncoils:Coil	PANTHER:PTHR10182
PANTHER:PTHR10182:SF15	PFAM:PF08569	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0002545364	UniProt:M4CDB4
MapMan:35.1	:	:	:	:	:

Description

AT5G18940 (E=4e-171) | Mo25 family protein

Coordinates

chrA10:-:10955546..10957543

Molecular Weight (calculated)

39862.5 Da

IEP (calculated)

5.845

GRAVY (calculated)

-0.099

Length

345 amino acids

Sequence
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLLALDT KTVVEVKALE KALEEVEKNF SSLRGMLSGD GEAEPNADQA VQLALEFCKE DVISLVIHKL HILGWETRKD
101: LLHCSSILLK QKVGEAYCCV QYFEEHFELL DCLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDT
201: VVSEFLTSHY PEFFDIYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYMK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLR NLSPGKGSED DQFEEEKELI IEEIQKMSRL KNLEL

Best Arabidopsis Sequence Match ( AT5G18940.1 )
(BLAST)

001: MSFSFFKPSR PKTPQEVVKA IRDSLMALDT KTVVEVKALE KALEEVEKNF SSLRGILSGD GETEPNADQA VQLALEFCKE DVVSLVIHKL HILGWETRKD
101: LLHCWSILLK QKVGDTYCCV QYFEEHFELL DSLVVCYDNK EIALHCGSML RECIKFPSLA KYILESACFE LFFKFVELPN FDVASDAFST FKDLLTKHDS
201: VVSEFLTSHY TEFFDVYERL LTSSNYVTRR QSLKLLSDFL LEPPNSHIMK KFILEVRYLK VIMTLLKDSS KNIQISAFHI FKIFVANPNK PQEVKIILAR
301: NHEKLLELLH DLSPGKGSED DQFEEEKELI IEEIQKLSGL KNLER

Arabidopsis Description

At5g18940 [Source:UniProtKB/TrEMBL;Acc:Q8L9L9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.